| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0108 |
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| Symbol | |
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| ID | 4461390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 131216 |
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| End bp | 132925 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700864 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_844246 |
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| Protein GI | 116747559 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.824706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.320607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCA TCTGGTTGAA GAGCTATGAT CCCCGAGTGC CTCACCACGC AGAATACCCG
GAAGAATGTC TGCCGCGGCT GCTCGAAGCG AGAGTGAAGA AGCTCCCCGG GAATTCGGCA
ACGGAGTTCT ACGGTGCCCG GTTGACTTAC GAGGCCTTGT GGAAGCAGAT TTCCAGCCTC
GCCAACGCCC TCCGGCTCCT CGGCTTGCGA CACGGCGACC GGGTCGCCGT CATGCTCCCG
AACTGCCCCC AGACCGTGAT CACGTATTAC GCGGTCCTCT GGCTGGGAGG CGTGGTCGTA
CTGACGAATC CGCTCTACGT CGAACGCGAG ATGGAACATC AGTGGAAAGA CTCGGGTGCG
AAGTACCTCG TCGTTCTGGA TCACCTCTAT CCCAAGGCCC GAAAGGTCAT CCCGGAGACG
GCGATCGAAA AGGTCATCGT GACCGGCATA GCGGAATGTC TCCCGTTCCT TCTGAAGCAT
CTCTATCCAC TCAAGGCGAA ACTGAAAAAA CTCTTCACGG CCGTTCCCTA CGATGAGCGG
ACGATTTTCA ATTTCACCCG GCTGATCCGC TCGACGGAGC CGACGCCTCC ACCTTGCGAG
GTGAGGCTCG ACGACCTGGC ACTGCTCCAA TACACCGGTG GAACCACGGG CATCGCCAAG
GGAGTCATGC TGTCCCACCG GAACATCCTG AGCAATGTCA TCCAGCTTGC CTCCTGGGTG
CAGGACCTGA GGTTCGGGGA GGAGCGTTTT CTCGCCCTTC TGCCGATCTT TCACGTTTTC
GGCATGACCG TCGCAATGAA TCTGCCCCTG TATGCGGGGA GCGCGCTGGT GCTCGTTCCG
AGGTTCGATA TCGACGAAAT CATGAAGACC ATCAGGAAGG CGAGGCCCAC TCTGTTCCCG
GGGGTTCCCA CCATATATGC GGCCATAAAC GGTCATCCGA AAGCGGAGAC GTTCGATCTG
TCCTCGATTC GCATCTGCGT TACCGGATCG GCCCCGATGC CGGTGGAGTC TTTGCGCAGG
TTCGAAAGTC TCACCGGCAG TGTCATTCTT GAAGGCTACG GCCTCTCGGA AACGAGCCCG
GTCACTCACG CCAATCCTGT CGAGGGGGTG CGCAAGCCGG GCTCGATCGG GTTGGCGCTG
CCGGATACCG ACTGCAAGAT CGTCGACCTG GAATTGGGAA CCCGTGACAT GGCTGTGGGT
GAGGTGGGTG AGCTGGTGAT CCGAGGGCCG CAGGTCATGA AGGCCTACTG GAAGATGCCG
GAAGAGACGG CCAACGCGCT CAGAGACGGT TGGCTCTACA CCGGAGACAT CGCGAGGATG
GATGAAGACG GGTATGTCTA CATCATCGAC CGCAAGAAGG ATATGATCAT ATCCGGGGGC
TACAACATTT ATCCGCGGGA GGTCGATGAG GTGCTCTACG AGCATCCGAA GGTTCTCGAC
GCCGTGGCCG TGGGCGTTCC CGACGATTAC CGGGGAGAAA TCGTCAAGGC GTTCATTGTG
CCCCGAGTGG GGGAGACCCT GACGGAAGAT GAAATCAAGC AGTTTTGCAA GACCAGATTG
GCGGCCTATA AGGTCCCCCG GCTGATTGAA CTGAGGGATT CCCTGCCGAA GACGGCGGTT
GGGAAAATCT CCAGGAAGGA GCTGCGCAAG CAGGCGCTTG ACGAGCATGA GTCGAAAAAG
ACGCGGGAAA AGGCCGATGA CGGGCGCTGA
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| Protein sequence | MDRIWLKSYD PRVPHHAEYP EECLPRLLEA RVKKLPGNSA TEFYGARLTY EALWKQISSL
ANALRLLGLR HGDRVAVMLP NCPQTVITYY AVLWLGGVVV LTNPLYVERE MEHQWKDSGA
KYLVVLDHLY PKARKVIPET AIEKVIVTGI AECLPFLLKH LYPLKAKLKK LFTAVPYDER
TIFNFTRLIR STEPTPPPCE VRLDDLALLQ YTGGTTGIAK GVMLSHRNIL SNVIQLASWV
QDLRFGEERF LALLPIFHVF GMTVAMNLPL YAGSALVLVP RFDIDEIMKT IRKARPTLFP
GVPTIYAAIN GHPKAETFDL SSIRICVTGS APMPVESLRR FESLTGSVIL EGYGLSETSP
VTHANPVEGV RKPGSIGLAL PDTDCKIVDL ELGTRDMAVG EVGELVIRGP QVMKAYWKMP
EETANALRDG WLYTGDIARM DEDGYVYIID RKKDMIISGG YNIYPREVDE VLYEHPKVLD
AVAVGVPDDY RGEIVKAFIV PRVGETLTED EIKQFCKTRL AAYKVPRLIE LRDSLPKTAV
GKISRKELRK QALDEHESKK TREKADDGR
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