Gene Sfum_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0107 
Symbol 
ID4461389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp130130 
End bp131119 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID639700863 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_844245 
Protein GI116747558 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAAT GCGTGTGCAT GATTGCTGAA TTCCGTGGCG GAAATTTTCG CCGCGTGTCG 
TTTGAGGTCG CCAGCGAAGG AAAGAGGATC GCGGATGCTT TGGGGATCGG CCTGCGTGGC
GTCGCCGTCG GTTCGGGCGT CGCGGGCAAG GCTGCGGAAC TGGGACAATA CGGGGTGGAG
AGGGTGCTGG TGAGGGACGA TCCCGCGCTG GAGCACTACC TTGCGGAAAT CTACGTGCCG
GTTGTGGCGG AGATGATCAA GAAATGCGAC CCTGCAGTGG TCATCCTCCC CGCATCCGTG
GACGGGCGGG ACCTTGGGGC GAGACTGGGA GCCCGGCTCG ACATCACTCT GGTTCAAGAC
GTTACCCAGG TCGTGTGCGA AGGGGGGAAA GTCAAGGCCC GGTGGCCCAT CTTTGGAGGA
AAATGCTTTG CGTGGAGCGA ATGGGCCGAT GGAACGCTGC CGATCATGTC TTGCCGGCCC
AACGTGATGG ATTGTCTGCC GCCCGACACG TCAAAGCGGG CGGAGGTGGA ACTGGCGGAT
ATTCCGATCC CGGAGAGCCG CTCGCGGGTC AAGGCCGTCG ACATGGACTC TTCCGGCAAG
GTGGAGCTGT CGGAGGCCGA CATTATCGTG TCCGGCGGCA GAGGCATGAA GGAAGCTTCG
AATTTCGCCC TCGTTGAAGA ATTGGCCAAA GCCATGGGGG CCGCCGTGGG CGCTTCCCGC
GCAGCAGTGG ACGCCGGTTG GCGTCCCCAT TCCGACCAGG TCGGCCAGAC CGGAAAAGTC
GTCACCCCCG CTCTTTACGT GGCGGTGGGG ATTTCCGGCG CCATCCAGCA CCTGGCCGGC
ATGGGCTACT CCAGGTACAT CGTGGCCATC AACAAGGATC CCGAAGCGCC GATTTTCAGC
AGGGCCGATT ACGGCATTGT AGAAGACCTC TTCAAATTCG TTCCCGCTTT TACGGAGGAA
GTCAAGAGAC TGAAAAGCAC CTGCTCGTGA
 
Protein sequence
MGKCVCMIAE FRGGNFRRVS FEVASEGKRI ADALGIGLRG VAVGSGVAGK AAELGQYGVE 
RVLVRDDPAL EHYLAEIYVP VVAEMIKKCD PAVVILPASV DGRDLGARLG ARLDITLVQD
VTQVVCEGGK VKARWPIFGG KCFAWSEWAD GTLPIMSCRP NVMDCLPPDT SKRAEVELAD
IPIPESRSRV KAVDMDSSGK VELSEADIIV SGGRGMKEAS NFALVEELAK AMGAAVGASR
AAVDAGWRPH SDQVGQTGKV VTPALYVAVG ISGAIQHLAG MGYSRYIVAI NKDPEAPIFS
RADYGIVEDL FKFVPAFTEE VKRLKSTCS