| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0104 |
|---|
| Symbol | |
|---|
| ID | 4461386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 126498 |
|---|
| End bp | 128426 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639700860 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_844242 |
|---|
| Protein GI | 116747555 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0455982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.104368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT ACGAGGTGAT TGTCGTGGGG GCGGGCCATG CGGGGTGTGA AGCGGCCCTG
GCGGCCGCGC GCATGGGCTG CCGCACGCTG GTGTTGTCCA TATGCCTCGA CACCGTTGCC
CACATGCCGT GCTCGCCTTC GGTGGGCGGG GTCGGCAAGG GACACCTGGT GAGGGAGATC
GATGCTCTCG GCGGCCGAAT GGCTCTGATC ACGGACCGGA CCGCCATCCA GTTCCGTCTG
CTCAACACCA AGAAGGGACC CGCAGTATGG GGGACACGCA CGCAAAACGA CAAGGCGCGC
TACCGCATCA GCATGAAACA TTGCCTGGAA TCGGAACCCA ACCTGGACCT CAAGCAGGCG
CACGTGGAAT CCCTGGCGGT GGAAGGCAAC CGGATCGTGG GAGTGATCGA TCAACTGGGT
GTCTTTTTTG GTGCCGATGC GGTCGTCCTG GCCACGGGCA CTTTCCTGCG CGGCCTGGTC
CACATCGGAA CGACCAGCGT GGAGGCGGGC AGGGCGGGGG AGCTTGCTTC GTATCCGCTC
GCGAACCAGT TGCAGCGACT CGGGTTCACC CTGGGGCGAA TGAAAACCGG GACCCCCGCA
CGACTGGGGC GGCGAAGCAT CGACTTCAGC CGATTCAGAG AGCAACACGG GGATGAGGCG
CCGAAGCCGT TTTCTCTTTT CACCGATTCG ATCGCTCTGC CACAGGTCTC ATGTTTCATC
GGCAAGACTC ACCAACGCAC CCATGAGCTG GTGCGACGCC ATATTCACCT GTCCCCGCTC
TACAACGGCA CCATCCGGGG GGTGTCCGCG CGCTACTGTC CGTCCCTGGA AGACAAGGTG
ATGCGATTCC CAGACAAGGA CTTCCACCAG ATCATCCTGG AGCCCGAGGG ACTCGATACC
GAGGAGGTCT ACGCCAGCGG CACCGGCAAT TCCCTTCCTT ATGATATCCA GCTCCGGCTT
ATCCACTCGG TGCCCGGCCT GGAAGAAGCG GAAGTGATGC GCCCGGCATA CGCCATCGAG
TACGATTTCG TTCAGCCGAC TCAACTCAAG GCCACCCTGG GGAGCAAGCT GGTCGAGGGT
TTGTACATGG CCGGGCAGAT CAACGGGACT TCGGGTTACG AGGAGGCGGC CGGGCAGGGG
CTGTGGGCCG GGATCAATGC CGCGCTCAAG GCTCAGGGAA GACCGCCCTT CATCCTGGAT
CGTTCGGAAG CCTACCTGGC CGTCATGGTG GACGATCTGG TGACCAGGGG AACCAACGAG
CCGTACAGGA TTTTCACCTC GCGCGCGGAA TACCGGCTCC TGTTGCGGGA AGACAATGCG
GACCTCAGGC TGCTCGAGAA GGGGTGCGAA CTGGGGTTGC ACTCGGCCGA TGCGGCCAAG
GAGTTGAGAG AGCGGCGCGG AGCGATCCGG AATGAACTGG AGAGGCTTCG CCTGACCCAC
GTGCGCCCCT CGGCGCAAGT CAATCAAACC CTGGCGGAAA ACCATTCGCC TCCCCTGGAT
GCTCCTGCTC CTCTGGACAA GCTCCTCAAA CGTCCCGAGC TGAATTACTC GACCGTGGCC
ATCCTGTCAC CGCCTCCCGA GCCGTTGTCG AGCAAGGTGA CGGAACAGGT CGAAGTGGAA
TGCAAATATG AGGGATATCT GAAACGCCAG GAGGCGGAAG TCGCGAAGTT CAGGCAACTC
GAGCAGGCGG CTATTCCGGA AGATTTAATG TATGACGACA TCCCCGGCCT TTCCAATGAG
CTCCGGCAGA AGCTCGGGGC GGTACGGCCG CTCTCTCTCG GCCAGGCGAC GAGGATTCCG
GGTATGACGC CCGCGGCCGT TTCCGTGCTG ATGGTTCATC TGCGACGCCG CGCCCAGGGC
GGGCCTTTCT TAGCGCCAGT GCTCGATCCG GGTGTAAATA TGCATTCTCA AAAGAAAAAG
CTTGCTTAA
|
|---|
| Protein sequence | MNKYEVIVVG AGHAGCEAAL AAARMGCRTL VLSICLDTVA HMPCSPSVGG VGKGHLVREI
DALGGRMALI TDRTAIQFRL LNTKKGPAVW GTRTQNDKAR YRISMKHCLE SEPNLDLKQA
HVESLAVEGN RIVGVIDQLG VFFGADAVVL ATGTFLRGLV HIGTTSVEAG RAGELASYPL
ANQLQRLGFT LGRMKTGTPA RLGRRSIDFS RFREQHGDEA PKPFSLFTDS IALPQVSCFI
GKTHQRTHEL VRRHIHLSPL YNGTIRGVSA RYCPSLEDKV MRFPDKDFHQ IILEPEGLDT
EEVYASGTGN SLPYDIQLRL IHSVPGLEEA EVMRPAYAIE YDFVQPTQLK ATLGSKLVEG
LYMAGQINGT SGYEEAAGQG LWAGINAALK AQGRPPFILD RSEAYLAVMV DDLVTRGTNE
PYRIFTSRAE YRLLLREDNA DLRLLEKGCE LGLHSADAAK ELRERRGAIR NELERLRLTH
VRPSAQVNQT LAENHSPPLD APAPLDKLLK RPELNYSTVA ILSPPPEPLS SKVTEQVEVE
CKYEGYLKRQ EAEVAKFRQL EQAAIPEDLM YDDIPGLSNE LRQKLGAVRP LSLGQATRIP
GMTPAAVSVL MVHLRRRAQG GPFLAPVLDP GVNMHSQKKK LA
|
|---|
| |