Gene Sfum_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0102 
Symbol 
ID4461384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp124691 
End bp125140 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content62% 
IMG OID639700858 
Productgeneral secretion pathway protein G 
Protein accessionYP_844240 
Protein GI116747553 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.573705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0126574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGGTT CTCAAGACAC GTGCCATGGC GGGAAGAACC CGAGACGGTC GAAGGCGGGG 
TTCACCCTCA TCGAATTGCT CATCGTCATG ATCATCCTTG GGCTGCTGGC CGCCCTGGTA
GGCCCCAGGC TGATCCACAA GCTCGGCGGT TCGCGGCAGC AGGCGGCAAA GACACAGATC
AGCATGATCG GAACCGCCCT GGATGCCTAC CGCCTGGACA TCGGCAGATA TCCGACCACT
GAAGAAGGCC TCGGCGCGCT GCGCAAGAAC CCCGGCTACA AGAAATGGGA CGGGCCGTAT
CTGAGTAAGG AACTGCCGGA CGACCCGTGG GGTCAGGCCT ATCTCTACCG GTCACCGGGA
GAACACGGCG AGTACGATCT CTACTCGCTG GGAGCGGACG CACAGGAAGG CGGCGAAGCG
GAAAACGCGG ACGTGGTGAA CTGGAACTGA
 
Protein sequence
MHGSQDTCHG GKNPRRSKAG FTLIELLIVM IILGLLAALV GPRLIHKLGG SRQQAAKTQI 
SMIGTALDAY RLDIGRYPTT EEGLGALRKN PGYKKWDGPY LSKELPDDPW GQAYLYRSPG
EHGEYDLYSL GADAQEGGEA ENADVVNWN