Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0101 |
Symbol | |
ID | 4461382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 123131 |
End bp | 124438 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639700856 |
Product | trigger factor |
Protein accession | YP_844239 |
Protein GI | 116747552 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.295209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0149701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTT CCGTTGTCGA TCTCAGTGAA AACCAAAAAA AGCTTCAGGT GGAAATACCC CCGGAAAAGG TGCGGCAGGA AATCGAGGGG AAATACCGGG AGATGTCCAG GCGGATCAAG ATCAAAGGGT TTCGGCCCGG CAAGGTGCCC CGCAGCATCA TCAAGTCCTA CTACGGCAAA ACCATAGAGC AAGAGGTCTC TTCACAATTC ATCCAGGAGA CCTTCCCTGA AGCGCTCAAG GAAACGGACC TCAAACCGCT CGTCGAAGCG GACGTCAGCG AGACGCACTT CAACGACAGC GGTTCTTTCT CCTATACGGC GATCGTGGAT GTCTGTCCGC CGTTCGAGCT GGAAGGGTAC AGGGGCCTGG AAATCCGCAA ACCGAGTATA GACGTCGCGG ATGAGCAGGT GGACTCGGAA CTGCAGCGCC TGCGCGAGCA GCACGCCGAG CTCCGCACGC TCGAGACGGA ACGCCCGGCA AGGGAAGGCG ACGTCGCGGT CATCGATTTC ACCCCTTCCG TTGACGGCAA AGTGTTCGAA AAAGGAAAAT CCGCCGATTA CATGGCGGAA ATCGGCAAGA AGGCCGTCCA TCCCGACTTC GACGCCAATC TGATCGGTCG CCGTGCCGGG GAAACCGTCT CCTTCGAGGT CGACTATCCC GAGAACGCTC CCATGCGGGA GATTGCGGGA AAAAGGGTGC TCTTCGAGGT GACTGTCAAG GAGGTCAAGG AAAAAGTTCT GCCGGAGCTC GACGATGACT TCGCTCAGGC CGTCAACAGC CGCTTCGACG CTCTCGACGC CCTGAAGCAG ACCATTCGCG AGGAGCTCCT GAAAAGGGAA GAATACCAGG CGCGGTCGGA CGTTCAACAG CAAATTCTGG ACCAGCTGCT GAGCAAGGTC AAGATCGAGC TGTCCGCCAA GGTCATCGAC CGCGAGGTCG ACCGGATGGT GGGAAATCTG CTGCACCAGT TTGAGAGCCA GGGACTGAAG ATGGACGTTT CCAAGTTCAA CACGCCGGAA ATCAGGGCCG ACTACAGGCC GCAGGCCGAG CGGAACATCC TGAGGCGGTT GATCCTGGAG AAGATCGCCG ACCAGGAAAA TCTGAAGCTC ACGGACGAGG AGATCGAGCA GGTCTACCAG GAAGTGGCCC GGTACGCCCG CATGGACGTG GCCACGGTGA AGCATGAATT TGCGGACAGT GCCGTCGTGG AACAGTCCAA GGAAAGCAAA ATCCAGGAGA AAGTGTTCCG GTTCCTCGAG TCGGAAGCGG TCTCCGGTCA CATCTCGCAG GAAGAAAAGA GCGAGTAG
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Protein sequence | MNVSVVDLSE NQKKLQVEIP PEKVRQEIEG KYREMSRRIK IKGFRPGKVP RSIIKSYYGK TIEQEVSSQF IQETFPEALK ETDLKPLVEA DVSETHFNDS GSFSYTAIVD VCPPFELEGY RGLEIRKPSI DVADEQVDSE LQRLREQHAE LRTLETERPA REGDVAVIDF TPSVDGKVFE KGKSADYMAE IGKKAVHPDF DANLIGRRAG ETVSFEVDYP ENAPMREIAG KRVLFEVTVK EVKEKVLPEL DDDFAQAVNS RFDALDALKQ TIREELLKRE EYQARSDVQQ QILDQLLSKV KIELSAKVID REVDRMVGNL LHQFESQGLK MDVSKFNTPE IRADYRPQAE RNILRRLILE KIADQENLKL TDEEIEQVYQ EVARYARMDV ATVKHEFADS AVVEQSKESK IQEKVFRFLE SEAVSGHISQ EEKSE
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