Gene Sfum_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0087 
Symbol 
ID4461398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp106093 
End bp107361 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content61% 
IMG OID639700840 
Producthypothetical protein 
Protein accessionYP_844225 
Protein GI116747538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.113697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000108237 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAAAGCCC GGGAACCCGA CACAATTGCC GGAATTCCAT TGACCCCTGA ATCCGGGTTG 
ATCCTGAGAT GCGTGCGCCA CTACTCCGGC AGGGACGAAA GGACGCGAAT CGCGCGGCAG
CTTCAGGGCC GCCTCGACTG GGACGCCCTC CTCCGCCTGG CGGAGGCCCA CAAAATCCTG
CCGATCCTGC ACGCGGTGCT CAAGGAATCC CATTGGCGCG AAGTGCCGGA ATCCGTGCTG
GAGACGATGA AGCGCAAGCA TGCAGCCAAT TTCGCCGGAA ATCTCCTGCT GAGCTATGAA
CTGATCAGAA TACTCGAAGC CTTGGGAAGC CGCGGCATCC GTTGCCTGGT GTTCAAGGGC
CCCACTTTGG CCGTGGCCGC CTACGGAAGC ATCGCCATGC GCCGGTTCCA GGATCTGGAC
CTTCTGGTTC GCAGGAACGA TTTCCTCAAG ACAAAGGACC TCTTGCGGGA AATCGGCTAT
CAACCCGCGC TGAGGCTCCC GGAAGCCTAC GAAAAACATT TCTACCTGAC GCGCTCGGAA
CACCATTTCG TCCGCAATGA CGGCAAGGCG ACGGTGGATC TGCACTGGGG ACTGTCGCCG
CCGTGCTTCT CCTTCTTCCA GGACCTGGAT CGGCTCTGGC CCCGTAGCGT GACGGTCGCA
ATCGAAGGCG CAACGGTCAG GGCTCCGGGT ATGGAAGACC TGCTCCTGTT TCTCTGCCGG
CACGGTGCGA AACACCGCTG GGAAGGCCTT TCCCTGATTT CCGATGTCGC CGTGCTGATT
GCGGCGCACC GCGCGATGGA CTGGCCCGGC GTCCTGGCGC GGGCGAAGCG GACCAACAGC
ACGGTGATGC TCGCGCTCGG CCTGAGACTG GCGGCTGAAC TAGCGGGAGC CGAAGTACCG
GAAAACATCG GGGACTGGAT GCGTGCCGAC CGCAAAGGAG AGGTCCTGGC AGGGAAGGTA
ATCCGTTCCC TGTTCAGCTC CGAAGAACGG CCGACGGTGG ATGTTGCCGA CCGGTTGAAC
CTCTTCCACA TGAGGACAAT GTCGAGATTC ACGGACAGAC TCCATGAAAT CGTCCTCAAT
CTGTTCACTC CCACATCCAT CGAATTGTCC CTCATCCGCC TTCCCGCGAG GTTGTATTTC
CTCTACTACC CCTGCCGCTT GTTGAGGCTG GCGGTCAGGA GCGTGTTGAA CAAAGCGCTT
CGAACACCAC GGCGGCAGAC CCCGGATCGC ACGGGCGCGA GGCGAACGTC GGGGTCGGAC
AAACCCTGA
 
Protein sequence
MKAREPDTIA GIPLTPESGL ILRCVRHYSG RDERTRIARQ LQGRLDWDAL LRLAEAHKIL 
PILHAVLKES HWREVPESVL ETMKRKHAAN FAGNLLLSYE LIRILEALGS RGIRCLVFKG
PTLAVAAYGS IAMRRFQDLD LLVRRNDFLK TKDLLREIGY QPALRLPEAY EKHFYLTRSE
HHFVRNDGKA TVDLHWGLSP PCFSFFQDLD RLWPRSVTVA IEGATVRAPG MEDLLLFLCR
HGAKHRWEGL SLISDVAVLI AAHRAMDWPG VLARAKRTNS TVMLALGLRL AAELAGAEVP
ENIGDWMRAD RKGEVLAGKV IRSLFSSEER PTVDVADRLN LFHMRTMSRF TDRLHEIVLN
LFTPTSIELS LIRLPARLYF LYYPCRLLRL AVRSVLNKAL RTPRRQTPDR TGARRTSGSD
KP