| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0086 |
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| Symbol | |
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| ID | 4461397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 104087 |
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| End bp | 105943 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639700839 |
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| Product | ABC transporter related |
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| Protein accession | YP_844224 |
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| Protein GI | 116747537 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0117635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000119825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGTCTGCC GAAGCAATCA CAAGCTGGCT GCAAAATTTC GCAAGGCGGC CGCTCAACTC
CCGAATCTCG TGCGTGCCGT ATTCATGGTC TGGGAGGCGA CCAGGGGCTG GACCCTTGCG
TGGGGCCTGC TCGTGGTGCT GCAGGGCCTG CTTCCCGTGG CCAACGTGTG GCTGCTCAAG
GTGTTGGTGG ACGGCCTTGC GGCCGCGGTC GGCAGTGGGC AGCCCGCGCC CCGTTTCCGT
TCGCTCCTCC TCGTCATCGT CGCAATGGCC GCCGTCACAT TGGTCGCCGA TGCCCTGCGG
AGCCTCACCA TCTGGATTCG CACGGCCCAG TCCGGCTTGT TCCAGGATCA CCTGAAACAC
CTCATCCAGC AAAAATCCAT GGAACTGGAC CTGGCCTTCT ATGAATCGGC CGAATTCTTC
GACCGTCTGT ACCGCGCGCA GTTCGAGGCG GGGTACCGTC CGATGATCCT GTTGGAAAAC
CTGGGCAGTT TGGCTCAGAA CGGAATTACC CTCGTGGCCA TGGCTGCGGT GCTCTTGCAG
TTTGGACCCT GGCTGCCGCT GATATTGATC GTCAGCACTC TGCCGGCCTT TTGCGTGGTG
CTGCGCCAGA ACTTGCGCGA ACATGAATTG TGGCTGCGCA CAACGGTGGA TGAGAGAAAG
AGCAGGTACT ACGATTGGGT GATGACCAGC CGTGAAACCG CTGCGGAGCT CCGCGTGTTC
GAATTGGGGA GTCATTTCAG CGCGCTCTTC CGCACCCTGC GGGAGGCGTT GCGCCGCGAC
CGGCTTGCTC TGACCCGTAA CCGGGCCCTG GCGGATCTGG GGGCGCGCAT CGTGGGGCTG
CTCATCACAG GGGCCGCCAT GGCATGGATG GTCTGGCGCG TGCTGCTCGG CGCCATCACG
CTTGGGGACC TGGCCCTGTT CTACCAGGCC TTCAACCAGG GCAAGCAGAT GATGGGAGGG
CTGCTGGAAA ACGTCGGCCA GATTTACAGC AACAGCCTCT TTCTTGAAAA CCTTTTCGAG
TTCTTCCGCC TCGAACCGGG AATCCGCGAA CCGGAAAGGC CTGTGAGCGC TCCTGCGCCT
TTGCGGGAAG GAATCCGCTT CCGGCACGTG GCGTTCCGCT ATCCCGCCAG TGAAAAGTGG
GCCCTCGGGG ATTTCAGCCT CACCGTTCCC GCCGGCAAAA TGGTTGCTCT GGTAGGTCCC
AACGGGGCGG GGAAGAGCAC GGTGATAAAA CTTCTGTGCC GACTCTACGA TCCCGAGGCG
GGACAGGTGG AACTGGACGG AGTAGATTTG CGATCCATTC CCCTGAGAGA GTTGCAGGAC
AACATCACCA TCCTGTTCCA GGAGCCGGTG AAATACAGCG CCATGGTGCA TGAAAACATC
GGTTACGGAG AGCTTGGGAA AATGAAGGAC TCGGCCGCCG TCGAAGTCGC GGCGCGACGG
GCGGGAGCCG ACGGATTCAT CGAGCGCTTC CCGGACCGCT ACGATACCTT GCTCGGGAAG
TGGTTTGAGG GCGGGATCGA TCTGAGTGCG GGCGAATGGC AGCGCATCGC TCTGGCTCGA
GCTTTCCTGC GGCAGTCTCC CATACTGATC CTGGACGAAC CGACCAGCTC GATGGATTCA
TGGGCCGAGG CCGACTGGCT CGGCAGGCTG AGGGGACTCG CGCAGGGGCG GACGGCCATT
CTCATCACCC ACCGTTTCAC TACCGCCATG CGGGCCGACA TGATTCACGT CATGGAGAAC
GGGGGCATCG TGGAGTCGGG GACTCACGAG GAACTGCTCC GACAGGGGGG CCGATACGCC
GAATCCTGGC GACGGCAGAT GCGAAATCTC GACCGGGACT CGACGCCGGA GCCGTGA
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| Protein sequence | MVCRSNHKLA AKFRKAAAQL PNLVRAVFMV WEATRGWTLA WGLLVVLQGL LPVANVWLLK
VLVDGLAAAV GSGQPAPRFR SLLLVIVAMA AVTLVADALR SLTIWIRTAQ SGLFQDHLKH
LIQQKSMELD LAFYESAEFF DRLYRAQFEA GYRPMILLEN LGSLAQNGIT LVAMAAVLLQ
FGPWLPLILI VSTLPAFCVV LRQNLREHEL WLRTTVDERK SRYYDWVMTS RETAAELRVF
ELGSHFSALF RTLREALRRD RLALTRNRAL ADLGARIVGL LITGAAMAWM VWRVLLGAIT
LGDLALFYQA FNQGKQMMGG LLENVGQIYS NSLFLENLFE FFRLEPGIRE PERPVSAPAP
LREGIRFRHV AFRYPASEKW ALGDFSLTVP AGKMVALVGP NGAGKSTVIK LLCRLYDPEA
GQVELDGVDL RSIPLRELQD NITILFQEPV KYSAMVHENI GYGELGKMKD SAAVEVAARR
AGADGFIERF PDRYDTLLGK WFEGGIDLSA GEWQRIALAR AFLRQSPILI LDEPTSSMDS
WAEADWLGRL RGLAQGRTAI LITHRFTTAM RADMIHVMEN GGIVESGTHE ELLRQGGRYA
ESWRRQMRNL DRDSTPEP
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