Gene Sfum_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0080 
Symbol 
ID4461171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp98054 
End bp99481 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content63% 
IMG OID639700833 
Productiron-sulfur cluster binding protein 
Protein accessionYP_844218 
Protein GI116747531 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.157943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000167452 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCCGCA TAAGGACCGA ACTGTTCAGG CAGGAAGCCG GGAAAGCCCT CAATAACCGG 
CACCTGCAGG AAGCTTTGAG CGATTTTCAG GAGCGCATCA GCAAGGCCAC GGCCACCGCC
TTCTCCAGTC TTTCGGATGC GGAGGGGTTG AGGCTGGAAG CCCGCCGGGC CCGTATGCGG
GCCATCGAAA ACCTCGACGT TCTACTCGAT AGGCTGGCTG ACAAAATTCT CAACCGTGGA
GGCCGGGTCT TTTTTGCCCG GGATGCCCGG GAAGCCGTGG AGTATTGCCT TGAGACGGCC
AGGCGGCTTG GAGTGAAGAA AGTGGTGAAG GGCAAGTCCA TGGTCGCCGA GGAAATCGGC
CTCAACGAGG CTCTGCAGGA GGCCGACATC CAGGTGTGCG AAACGGACGT GGGCGAATTC
ATCGTCCAAC TGGCGGGCGA ACCTCCTTCT CACATCATCG CCCCCGCGGT TCACAAGACA
AAGGTGGAAG TGGGCCGGCT CTTCTCGGAA AAGCTCGGGA TTCCGTACAC CGACGATCCC
GTTGCGCTCA CTCGGGCGGC CAGGAATGCG CTTCGGCAGA GATTCCTGGA GGCGGACATG
GGAATTTCCG GCTGCAACCT GGCTTGCGCC GAGACCGGCC ACATCACTAC GGTTTCCAAC
GAGGGCAACA TTCGCATGGC CTCGACCTTG CCGCGGGTGC ATATCGCCAT CATGGGCATG
GAAAGGATCG CGGCGCGCCT CGAAGACCAC GACGTCCTGC TTCGCCTGCT CTGCATGGGC
GCCGCCGGCC AGAGGCTGGC GGGCTATGTC TCCTACCTGG GCGGTCCGAG GCAGCCCGAC
CAGGAAGACG GCCCCGATGA ATTCCACCTC GTCGTTCTCG ACAACGGCAG GTCCAGGATC
CTCGCCGATG AGGATTTCCG GGAAATCCTG TGTTGCATCC GCTGCGCCGC GTGCCTCAAC
GTGTGTCCGG TGTACGGGAA GATCGGGGGA CACGCCTACG GACACGTCTA TTGCGGTCCG
GTGGGCTCGG TCCTGACTCC GCTGCTCGTG GGCGTGAACC GGGCGAAAGA CCTGTGTCTC
GGCGAGACCC TGTGCGGGGC GTGCCGGGAC GCGTGCCCTC TTCACATCGA TATTCCCGGG
ATGCTCCTGC GGCTGCGGTC CAAGCTCGCC GACGGGGATG ACGGGTGGGG CGTAAAGCGT
GAGCGGCCCG CCGAAAAGCT GTTCTTCACG CTGTGGGCCG GACTCGTACG GTCACCCGGT
CTCTACGCGC TTGCACTCAC CGCGGCGGCT TTCCTGCAAC GGTTGCCGCC GGGCGCAAAG
GACACCATAA CCCGGCTGCC TTACCCGTTT CACGAGTGGA CGCAAAGCCG CGACATCAAG
CGTCTCGATG GACGAGCCTT CAGGAAACGG TGGAAGGAAC TCCGATAG
 
Protein sequence
MTRIRTELFR QEAGKALNNR HLQEALSDFQ ERISKATATA FSSLSDAEGL RLEARRARMR 
AIENLDVLLD RLADKILNRG GRVFFARDAR EAVEYCLETA RRLGVKKVVK GKSMVAEEIG
LNEALQEADI QVCETDVGEF IVQLAGEPPS HIIAPAVHKT KVEVGRLFSE KLGIPYTDDP
VALTRAARNA LRQRFLEADM GISGCNLACA ETGHITTVSN EGNIRMASTL PRVHIAIMGM
ERIAARLEDH DVLLRLLCMG AAGQRLAGYV SYLGGPRQPD QEDGPDEFHL VVLDNGRSRI
LADEDFREIL CCIRCAACLN VCPVYGKIGG HAYGHVYCGP VGSVLTPLLV GVNRAKDLCL
GETLCGACRD ACPLHIDIPG MLLRLRSKLA DGDDGWGVKR ERPAEKLFFT LWAGLVRSPG
LYALALTAAA FLQRLPPGAK DTITRLPYPF HEWTQSRDIK RLDGRAFRKR WKELR