Gene Sfum_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0075 
Symbol 
ID4461165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp92497 
End bp93741 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content62% 
IMG OID639700827 
Producthypothetical protein 
Protein accessionYP_844213 
Protein GI116747526 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000235956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATGG AACACCCCAA GCTGCGTTAC GGACTGGAAG CTTTGCCCAT GCAACACGAA 
GGACAGAACA TGATCCTTCT CAGGGACCGA ATGGGCCACA GCTCGGACTC CCTGCTGCTT
TCTCCCGTTG TTGCGGAACT GGTGATCCGC ATGGACGGAA CGAATTCCTT TCGGGATCTG
CAGGCCCTTT TCCTGCGCAT GACCGGTGAA ATGCTGTACA CGGAGACGCT CGACGAAATC
GTGCAGAAAC TGGACCAGAA CCTCTTCCTC GAGAATGCGA GATTCATCGA TCATGTGGCA
AGGCAGGTCG CGCGCTACCG GGACGATCCC GTGAGAAGGA TGCGGCACGC CGGGCAGAGC
TACCCGAGCG ATGCGGAGCT GTTGAATCGG CGGCTGGAGG GGTTTTTCTC GGCGGAAGAC
GGAGGCCCCG GGCTTCCGGG GGCGGCGCGC GACAACCGGC CCGTGCTGGG ACTGGTCGCT
CCACATATCG ACATTCAGGC TGGCGGCCGG TGCTTTGCGC ATGCCTACAA GGCCGCCGCG
GATTCCGTTT CGCCGCGGAC CTGGATCGTG CTCGGCACCG GGCATGAACT GGTATCCAAC
TATTTCGCTC TGACCGCCAA GGACTTCGAG ACCCCCCTGG GGCTGGTCGG TCATGACGAA
GAATGCTGCG CGCATCTGGT TAATTCGGCG AAGCGCGATA TCCTTGCCGG CGAATACAAC
CACGTACGGG AACACACGGT GGAATTCCAG GCTGTATTCC TGGCTTATGT CCAGCCGGGG
GCGAAGATCG TGCCCCTCCT GTGCTCCTTT TCGCACGAGG ACCTGGAAAC GGACGGGGAA
TACATCGATC ATTTCGCCGG TCTCCTTCGC GACCTGGTGC TTACCCGTTC CGTGGGAATT
CTGGCCAGCG TCGACCTGGC CCACATCGGT CCGCGCTACG GGGACCGCTT CCAGCCGACC
GACAGCACGG TGAAGGACCA CATGGCCTCG GACCGCGGGC TTGTGGAAAG CCTGCGCGAA
TGCGACGCCG AAGCTTTCAT CCGCCAGATC CGCCTCGAAG GAAACCGGCG GAAAATCTGC
GGGGTCGCGC CCCTGTATGT GCTGGCCCAA GCGCTCTCCG GTCTCGCGCA GGGACGGCTC
CTGGATCACG CGCACGTCAG GGTCGATCCC TATGGGTCTT TCGTCACCTT TGCGAGCATG
ATTTTCCATG GGACGCAGGC GAGCCCTGGG TCGGATTCGG AGTGA
 
Protein sequence
MTMEHPKLRY GLEALPMQHE GQNMILLRDR MGHSSDSLLL SPVVAELVIR MDGTNSFRDL 
QALFLRMTGE MLYTETLDEI VQKLDQNLFL ENARFIDHVA RQVARYRDDP VRRMRHAGQS
YPSDAELLNR RLEGFFSAED GGPGLPGAAR DNRPVLGLVA PHIDIQAGGR CFAHAYKAAA
DSVSPRTWIV LGTGHELVSN YFALTAKDFE TPLGLVGHDE ECCAHLVNSA KRDILAGEYN
HVREHTVEFQ AVFLAYVQPG AKIVPLLCSF SHEDLETDGE YIDHFAGLLR DLVLTRSVGI
LASVDLAHIG PRYGDRFQPT DSTVKDHMAS DRGLVESLRE CDAEAFIRQI RLEGNRRKIC
GVAPLYVLAQ ALSGLAQGRL LDHAHVRVDP YGSFVTFASM IFHGTQASPG SDSE