| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0074 |
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| Symbol | |
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| ID | 4461164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 90604 |
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| End bp | 92307 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639700826 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_844212 |
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| Protein GI | 116747525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00635622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCTGC GATACCTTCT CATCATTGCA GTGCTTTCCG TGTGCAGTTG CACCCAGCTT
AAACCGTACG CGGCGACATC TTCCACCCCC AAAGCCCCGG CAGCCCGCTC CGAGTCGGGC
TCACGCGCCG ACTTGTACTT CGAGTACCTG CTCGCCCAAT ATTATGTCAG CGTGAAAGAA
ATCGACAAGG CCATTGAAGC ATACCACGAA GCCCTGAAAA AGGATCCCCG ATCGCCGATG
CTGCTCACCG AGTTGGCCGC TCTCTTGATC CGGCAGGGCA AGATCGAACA GGCCCTCAAG
CTCACCGAAG ACGCCACGAG CTTTGACCGC ACCTACGAGC CCGCCTACAT GCTCCTCGGA
CAGCTGTATG CCGGAATCGG GCAGAATGCC AGGGCCATCG ATGCATATAG CCGGGCCATC
GAGATCAATC CTTCCAACGA GGATGCGCAC CTCCTTCTGG GCGCGCTCTA CGCCCAGGAG
AAGAAATACG ATGAGGCGAT GGAGGCATTC GACCACCTCA AGGCCCTGCT CCCGGACAAC
CCTGTGGCAC TGTACTACAA GGCACGGGTT TTCCTGGACA TGAAACTTTA CAAACAGGCC
GAAAAGATCT ACCTCGACGT TCTTGCGATC GAACCCGCAT TTGAAAACGC CTCTCTCGAC
CTGGCATACG TTTACGAGGT GACCGAACGG CTGAAGGACG CCGAGCAGAC CTATCTGCAG
ATCCTGTCGG CGAATCCGGC CAATGTAAAC GCCCGCACGC GGCTGGGCAA CCTTTACATG
CGCCAGGACA GGCCCGCGGA GGCCTTACGG CATTTCTCCC ATCTTCTGAA GCTCAACCGC
AAGGATGTCG AGAGCCGTTT GAAAGTGGGC ATCATCCACC TTCAACAGAA GGATTACGAG
GAGGCCATCA AGGATTTCAC CTACCTGTTG AAGGACGAGC CGCAGTACGA CCAGGCTTTG
TACTACCTGG CCAGCACCTA TGCGGAAAAA CAGGACTTCG AGCAGGCCAT CCGCAACTTC
CGGCTGATCG CACGGAGCAG CCCGCTCTGG CCCATGGCCC AGACCCGCCT CGCCTTGATT
TTCTCCAAGC AGAAGGACTT CCAGAACGGT GCGGCGGTCC TCAAGGAGGC GATCGACGCC
CAACCGGAAG TGGCCGATCT GTATCTCTAT CTCGGCATCA TCTATGAAGA AGCGAAACAA
TACGAGGATG GCGTCGCGGC GGTGGACAGG GGTCTGGTCA AGACTCCGCG AGACACCGAT
CTCCTGTTCC GAAAAGGGGT CATTCTCGAC AAGATGTCCC GAAGGGATGA CGCCATCGCC
GTGATGAAAC GGATCCTCGA GATCGAGCCT CAGAACGCCA ATGCCTTGAA CTACATCGGG
TACACGTATG CGGAGATGGG AATCAACCTC AACGAAGCCC GCCAGATGAT CAAGGCGGCC
CTGGCCACCG CTCCCGATGA TGGTTACATC ATGGACAGCC TCGCCTGGGT CTACTACAAG
CTGGGGCAAC ACAAGAAGGC TTTGGAGACC ATTCTGGAGG CATTGAAGCG CGTTCCGCAG
GACCCCGTCA TCCACGAGCA TCTCGGGGAC ATTTACTTGA GTCTCGGAAA GAAGAACGAA
GCCATCGAGG CCTATGAGAA AGCGCTGGAG TACAGCCACA CGGAGCCCGA GAAGATCCGG
GAGAAGCTGG ACCGGCTCAA GTAG
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| Protein sequence | MILRYLLIIA VLSVCSCTQL KPYAATSSTP KAPAARSESG SRADLYFEYL LAQYYVSVKE
IDKAIEAYHE ALKKDPRSPM LLTELAALLI RQGKIEQALK LTEDATSFDR TYEPAYMLLG
QLYAGIGQNA RAIDAYSRAI EINPSNEDAH LLLGALYAQE KKYDEAMEAF DHLKALLPDN
PVALYYKARV FLDMKLYKQA EKIYLDVLAI EPAFENASLD LAYVYEVTER LKDAEQTYLQ
ILSANPANVN ARTRLGNLYM RQDRPAEALR HFSHLLKLNR KDVESRLKVG IIHLQQKDYE
EAIKDFTYLL KDEPQYDQAL YYLASTYAEK QDFEQAIRNF RLIARSSPLW PMAQTRLALI
FSKQKDFQNG AAVLKEAIDA QPEVADLYLY LGIIYEEAKQ YEDGVAAVDR GLVKTPRDTD
LLFRKGVILD KMSRRDDAIA VMKRILEIEP QNANALNYIG YTYAEMGINL NEARQMIKAA
LATAPDDGYI MDSLAWVYYK LGQHKKALET ILEALKRVPQ DPVIHEHLGD IYLSLGKKNE
AIEAYEKALE YSHTEPEKIR EKLDRLK
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