Gene Sfum_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0073 
Symbol 
ID4461163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp89747 
End bp90532 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID639700825 
Producthypothetical protein 
Protein accessionYP_844211 
Protein GI116747524 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0162611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT CCCGCTTTCA TGCCGTGCTG CTGGGTCTGA TCATGCTCTG CTGCCTCTCG 
TGCGGGAAAC CCAAACCGCC GGAGGTGCTG CCCCGGCCCG TTTCCTTCGA CGAAAACCTC
GGCAAGCTTG AAGCGAGGGC CGCCCACTGG CGAAGTTATC AGGCAAAACT GCGTATCAGG
CTCGAGGGCG CCAAGGGCAA GATGCGTTTT CAGGCCATCG TTCTGGCCGT TCTGCCGGAT
CAGTTGCGCC TGGAAGCCTT CAACCTGGTC GGGCAGACCG TTGCGCTGTT CACCATGAAC
AACGGCAAGC CTGCCCTGTC CATTCCTTCC GAAAAGATGA TCTTCACGGC CGAGCGGCCC
GAAACGCTCA TCGAGTACTT CTTCGGCATG CCTTTGCCCG CCGGGGTCTT CGCATACGAC
CTTGCCGCGG TCGTGCCTCC GGAACAGCTC GACAAGCTCA GTCCACGCCG GGAAGCACCG
GGCTGGAAGG CGGATTTTTC TCCCGAGGGA AGTGACGCGT CCTTTCTCTG GGAGTTCGAG
GACAATCCTC CCGCCCTGAA ATCTCTTGCT GCAAGAGACG GGTTGTGGGA CCGTCGCATC
ACCTACGATC CCGCAGTCGA ACTGGAACCG CAGAATGCAC CTCGGAAACT CCGACTCGAA
TCGGCGCAAT GGCGGATGGA AATAACCGTC GAACAGATCA TGCCCACTTC CGGCTTCGAT
GCGTCGGTCT TTGTCCCGCC CGTTCAAGAG GGCGTCCGTA CCGTCGACCT GGATTCGATC
AAATGA
 
Protein sequence
MKTSRFHAVL LGLIMLCCLS CGKPKPPEVL PRPVSFDENL GKLEARAAHW RSYQAKLRIR 
LEGAKGKMRF QAIVLAVLPD QLRLEAFNLV GQTVALFTMN NGKPALSIPS EKMIFTAERP
ETLIEYFFGM PLPAGVFAYD LAAVVPPEQL DKLSPRREAP GWKADFSPEG SDASFLWEFE
DNPPALKSLA ARDGLWDRRI TYDPAVELEP QNAPRKLRLE SAQWRMEITV EQIMPTSGFD
ASVFVPPVQE GVRTVDLDSI K