Gene Sfum_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0069 
Symbol 
ID4461159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp86914 
End bp88029 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID639700821 
Producthypothetical protein 
Protein accessionYP_844207 
Protein GI116747520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.568066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0454782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAG GTCAGACCGC CCCGGATAGG TTCTCCGGTA CTGTCGAACG CGTGGCACTG 
GCAGACCTGA TGCAGATGAT CTGCCTGGCT CAAATGAGCC ATGCGATCGT CGTGCAGCAC
GAATCGGGAA CCGGAGCCAT TTTCGTGCGT TCGGGCCAGG TTTGCCATGC CGTACTGGGC
GGCGCTCAGG GGGAGGAACC CCTGTTCGAA ATGTTGAGAT GGCGGAGTGG AAAGTTCGAT
GCCGCCCCGT CTCAATCATC GGATACACCC GCTACGATCA CCCGGGGTTG GGAATACCTG
CTGATCGAAG CCATGCGATC GCGCCTCACG GGCGAAGAGG CGGCGGGCGA GAGTGCGGGT
CCAGTGCTGT CGGCGGGTTT TGCCGGTCGG CTCGGCGGCG TCCAACTTTC CGATCTCGTT
CAACTCGCCT GCATGTCCCG AACCGACCAC GTTTATGAAG TCAAGACCGA GCCAAGAACG
GGGAGAATCT ACGCCCGGTC CGGTCAGGTC TATCATTCCG AATGCGGTAA GCTGCAGGGG
GAAGATGCTT TCTGCGAGTT GCTCCTGGCC GAAACCGGCG AATTCCGGAC GGTTTCTCTC
GAAGGCGAGC CCCCGGAGAC CATAGCCAAG CCCTGGGAAT ACCTCCTCAT GGATGCCATG
CGCTACCGCG ACGAGAAGAC CGGCGGCGCC GGGGAGGAGC TTGAGGAGGA AATCCAGAGT
CTTCTGACAA AATTGCACAG GATGAAGGTC AGCGAGAAGA TCCGGGCGGC GATGGTCGGG
GACAAGGAAG TACGCTCCCT GCTCATCAGG GAACCCAACA AGCTGGTTCA AATTGCCATC
ATCAACAACC CTCGCATCAC GGAAGGTGAG GTGAGCGCGA TTGCAAGCAG TCGGAACGTG
GACGAGGAGG TGTTGCGCCG AATTGCAAAT ACCCGTGAGT GGATGAAGAT TTACGCCGTC
AGGCTGGCCC TCACGACCAA CCCGAAGTGT CCGTTGCCCA GTGCCCTGAG ACTTCTCCAG
GGGCTTACGC AGCACGACAT CAGACAAATC GCGAAGAGCA AATCCGTACC GATCGGGCTG
GCCCAGACCG CGCGGCGGTT GATCCATGAA CCATAG
 
Protein sequence
MAQGQTAPDR FSGTVERVAL ADLMQMICLA QMSHAIVVQH ESGTGAIFVR SGQVCHAVLG 
GAQGEEPLFE MLRWRSGKFD AAPSQSSDTP ATITRGWEYL LIEAMRSRLT GEEAAGESAG
PVLSAGFAGR LGGVQLSDLV QLACMSRTDH VYEVKTEPRT GRIYARSGQV YHSECGKLQG
EDAFCELLLA ETGEFRTVSL EGEPPETIAK PWEYLLMDAM RYRDEKTGGA GEELEEEIQS
LLTKLHRMKV SEKIRAAMVG DKEVRSLLIR EPNKLVQIAI INNPRITEGE VSAIASSRNV
DEEVLRRIAN TREWMKIYAV RLALTTNPKC PLPSALRLLQ GLTQHDIRQI AKSKSVPIGL
AQTARRLIHE P