| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0065 |
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| Symbol | hslU |
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| ID | 4461155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 81161 |
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| End bp | 82561 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639700817 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_844203 |
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| Protein GI | 116747516 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.215309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC CGCTGACGCC TGCGGAAATC GTTCAGGAAC TGGACAAGTA CATCATCGGG
CAACGAGACG CCAAACGCAT GGTCGCCATC GCCCTGCGCA ACAGGTGGCG TCGACAGCAG
GTCCCCGAGC ACCTCAGGGA TGAGATCGCG CCGAAGAACA TCATCATGAT CGGCCCCACC
GGCGTGGGGA AAACGGAGAT TGCACGCCGC CTGGCCAGAC TGGCCCAATC GCCGTTTCTC
AAGATCGAGG CGAGCAAATT CACCGAGGTG GGTTATGTCG GCCGTGATGT GGAATCCATG
ATCAGGGACC TCTCGGAACT CGCGGTCAGC ATGGTGCGGA CGGAGGAAAT GGAAGCGGTC
AAGATCAAGG CGGAGGAATT GGCCGAAGAG AAGCTCCTCG ATATCCTGCT CCCGCCCAAA
CGGCAGCAGG AGTCCAGGGA ACAGGAACTG CCGGTCCCGG TGGAGCCGCA GGAGGCGCGC
GAGCCCCGGG AGGCCGCCCG GGAAGAAGCT GTCCAGGCCG ACTCCACGCG CGAAAAGCTG
CGCAAGCTAC TGCGCAAGGG CGCCCTCGAC GACCGCTACG TCGAGTTGGA CGTTCCGGAC
CGCAATTTCC CCATGGTCGA AATCTTTGCC GGGACCGGGA TGGAGGACAT GGATTACAAC
CTGCGCGACA TGCTCGGGTC CATGCTGCCC CGGCGCACCA AGCGGCGCAA GGTGAAGATC
CCGGAAGCCC GCGAGATACT GGTCCAGGAG GAATCCCAGC GGCTCATCGA CATGGACAAG
GTGATCAAGT CCGCCATCGA GAGAGTCGAG CACTCCGGCA TCATTTTCCT CGATGAAATC
GACAAGATTG CCGGGCGGGA ATCCGGCGGA CGCGGACCCG ACGTGTCCCG CGAAGGGGTC
CAGCGGGATC TGCTGCCCAT TGTGGAAGGC TCCACGGTCA CCACCAAGTA CGGCATGGTC
AAGACCGATC ATATCCTGTT CATCGCCTCC GGGGCCTTTC ATATTTCCAA GCCCTCGGAC
CTCATTCCCG AGCTTCAGGG CCGGTTCCCC ATCAGGGTCG AGCTCGCTTC CCTGACGAAG
GAGGATTTCG TCCGCATCCT CAAGGAACCG GAGAACGCGT TGATCGTTCA ATACAAGTCG
CTGCTGGCCA CGGAGGAGGT TGAGCTCACT TTCGACGATG AAGCCATCGA AGAGATCGCA
GGTCTCGCTT TCCAGGTCAA CGCGAGAACG GAGAACATCG GAGCGAGACG ACTGCATACC
ATCATGGAGA AATTGCTGTC CGACATTTCA TTCAACGCGC CGGATCTGAA GGGCCAAAAG
ATACCGATCA CGCGGCAATA CATTCAGGAA ACCCTGAGCG ACATCATCAA GGACGAGGAC
CTGAGCCGCT ATATTCTTTA G
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| Protein sequence | MQKPLTPAEI VQELDKYIIG QRDAKRMVAI ALRNRWRRQQ VPEHLRDEIA PKNIIMIGPT
GVGKTEIARR LARLAQSPFL KIEASKFTEV GYVGRDVESM IRDLSELAVS MVRTEEMEAV
KIKAEELAEE KLLDILLPPK RQQESREQEL PVPVEPQEAR EPREAAREEA VQADSTREKL
RKLLRKGALD DRYVELDVPD RNFPMVEIFA GTGMEDMDYN LRDMLGSMLP RRTKRRKVKI
PEAREILVQE ESQRLIDMDK VIKSAIERVE HSGIIFLDEI DKIAGRESGG RGPDVSREGV
QRDLLPIVEG STVTTKYGMV KTDHILFIAS GAFHISKPSD LIPELQGRFP IRVELASLTK
EDFVRILKEP ENALIVQYKS LLATEEVELT FDDEAIEEIA GLAFQVNART ENIGARRLHT
IMEKLLSDIS FNAPDLKGQK IPITRQYIQE TLSDIIKDED LSRYIL
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