Gene Sfum_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0061 
Symbol 
ID4461151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp76678 
End bp77883 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content60% 
IMG OID639700813 
Productargininosuccinate synthase 
Protein accessionYP_844199 
Protein GI116747512 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.372491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGA AAAAAGTGGT TTTGGCTTAT TCGGGCGGCT TGGACACCTC GATCATTCTC 
AAATGGCTGA TCGAGAGTTA CGGTTGCGAG GTGGTCGCAT TTTCCGCCGA TCTCGGCCAG
GCGGAGGAAC TTGACGGCCT CGAGGCGAAG GCCCTTGCGA CGGGCGCGGT CAAGGCGCGT
ATCGTCGATC TGCGCGAGGA GTTCGTGCGC GATTTCGTTT TTCCCGCGTT CCGGGCCAAT
GCAATTTACG AGGGTCAGTA CCTGTTGGGG ACATCCATCG CCCGGCCGCT GATCGCCAAA
GCCCAGATCC GGATTGCGGA GGAGGAAGAC GCCGATGCCG TGAGCCACGG CGCCACCGGC
AAGGGAAACG ACCAGGTCCG GTTCGAGCTC ACCTACATCG CGCTCAATCC GGCCATCAAG
ATCATTGCTC CGTGGCGGGA GTGGGACCTG AAGTCGCGCA GCGATCTCGT GGAGTTCGCG
CGCAGGCACG GGATTCCGAT CCCGGTCACC AAAGAGAAAC CCTACAGCTC CGACCGCAAT
ATGCTGCACA TCAGCTACGA GGGGGGCATC CTCGAAGACC CATGGCTGGA GCCGGATCCG
GCGATGTTCA CGTTGAGCGT GGCACCGGAA GAGGCGCCGG ACGCGCCGGA ATTCGTCGAA
ATCGATTTTG AACGAGGCAA CCCGGTGGCG GTGAACGGGG AGCGGTTGAG CCCCGCTCAG
CTGCTGACCC GGCTCAACGC GCTCGGCGGC AGGCACGGCA TCGGTCGCGT GGACCTCGTG
GAAAGCCGTT TTGTCGGCAT GAAATCACGG GGCGTTTATG AGACTCCGGG CGGGACCATC
ATGCGGACGG CACACCATGC GGTGGAATCC GTCACCATGG ACCGTGAACT GATGTTCCTG
AGGGATTCCC TCGTCCCGCA GTATTCCCGC CTGATTTACA ACGGTTTCTG GTATTCCCCG
GAGATGCGCC TGCTCCAAAA TACGATGGAT CTCGCTCAGG AAAACGTGTA CGGTACCGCA
AAATTGAAAC TCTATAAGGG AAACTGTGTC GTGATCGGGC GCAGGTCGGA CCGGTCACTG
TATCAGCCGA GCTTCGCCAC TTTCGAAGAA GACGACGTCT ATCGGCAGGA CGATGCAACC
GGTTTCATCA GACTACATGG ATTGAGGCTT CAGATCGAAT CCCTGGTCCG CGGCAAATCG
CGCTGA
 
Protein sequence
MDVKKVVLAY SGGLDTSIIL KWLIESYGCE VVAFSADLGQ AEELDGLEAK ALATGAVKAR 
IVDLREEFVR DFVFPAFRAN AIYEGQYLLG TSIARPLIAK AQIRIAEEED ADAVSHGATG
KGNDQVRFEL TYIALNPAIK IIAPWREWDL KSRSDLVEFA RRHGIPIPVT KEKPYSSDRN
MLHISYEGGI LEDPWLEPDP AMFTLSVAPE EAPDAPEFVE IDFERGNPVA VNGERLSPAQ
LLTRLNALGG RHGIGRVDLV ESRFVGMKSR GVYETPGGTI MRTAHHAVES VTMDRELMFL
RDSLVPQYSR LIYNGFWYSP EMRLLQNTMD LAQENVYGTA KLKLYKGNCV VIGRRSDRSL
YQPSFATFEE DDVYRQDDAT GFIRLHGLRL QIESLVRGKS R