Gene Sfum_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0059 
Symbol 
ID4461149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp74133 
End bp75224 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content58% 
IMG OID639700811 
Productfibronectin, type III domain-containing protein 
Protein accessionYP_844197 
Protein GI116747510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.798921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAT CAGTCCATCG TTTCATGCAG ACTCGTCGTT TAGCCGGTGT GATTTGTGTC 
CTTATCCTTG GATTGACGGT CGGCAGTTGC GGCAGAAAGA CTTTCCCCAG GCCCGAATCG
ACCGACGCAC AGCCTCAGAT CCGAGACCTT CAGGTCCAGG TACGGGCCAA AGGGGTCGAG
CTTACATGGA CCATCCCGCC TCAGATGCGA AAGATTTCGA AGGAAAACCC GTATCGTTTC
AACATCCTGA GATCGGAACT GTTGTGGGAG AACAGAAACT GCCTGGATTG TCCGGCCACC
GTGCAGAGGG AACTCCAGAT GATCGATCCG GTCTATCCCG ATCCCGCTCT CGTTCACGAC
GGCAAACTGA GCTGGACGGA TCCGGCGGTT TCCCTGCAGC ACGCGTATCG TTACCAGATT
GTCATTCAGG ACAAGGACGG GCGCCCTGTA ACCATGTCCA ACACGGCGAT CGCCAAGGTT
TTCCATCCGC CCGGTCAGAT CAGGAGCCTG AGCGCCATGC CCGGGCCGCA GGGCATCCTC
GTGCAGTGGA AGCCGCCCGC CAGGGATAAT CAAGGACAAC CCATGCAGGG AGAGTTGCTG
TTCGTGGTGG AACGACTCTC GGCCACCAAG GTTTGGGAAC GCATTTCGCC TGCGCCGATC
AAGGCCAACA ACTACCTGGA CCAGGGCATT GCGGCGGATC GCATGTACGG GTACCGGGTC
ACGCCCGTTC TCTACTTCGA GGACACGCCC ATCGTCGGCG AGCCCGCCCT GACGCACCAG
GTCAAAGCTC CGGAAGCCCT TCCGCCGCCT CCTCCCGCCA ATGTATGGGT CATCCCGTCC
AAGGGCACTC TGGAAGTCCA ATGGACCGAG AGCACTGAAA AAGTGGCCGG GTATCACGTG
TATCGTCGTG AAGGCAAGGA GATGGTGCGA CTGACTGCCA ACCCGATCCA GCATCCCCCG
TACGTCGACC ACACCGCGAA ACCCAACACG GTTTACTTCT ATGCGGTTTC TTCGGTGAGC
AGTCAACACG ACAACCGGGA AGGTCTGCTG TCCAAATGGG CTGAAATCAG GAGCCTGATG
TTCGAGAAAT AA
 
Protein sequence
MKTSVHRFMQ TRRLAGVICV LILGLTVGSC GRKTFPRPES TDAQPQIRDL QVQVRAKGVE 
LTWTIPPQMR KISKENPYRF NILRSELLWE NRNCLDCPAT VQRELQMIDP VYPDPALVHD
GKLSWTDPAV SLQHAYRYQI VIQDKDGRPV TMSNTAIAKV FHPPGQIRSL SAMPGPQGIL
VQWKPPARDN QGQPMQGELL FVVERLSATK VWERISPAPI KANNYLDQGI AADRMYGYRV
TPVLYFEDTP IVGEPALTHQ VKAPEALPPP PPANVWVIPS KGTLEVQWTE STEKVAGYHV
YRREGKEMVR LTANPIQHPP YVDHTAKPNT VYFYAVSSVS SQHDNREGLL SKWAEIRSLM
FEK