Gene Sfum_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0053 
Symbol 
ID4461143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp67923 
End bp68417 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID639700805 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_844191 
Protein GI116747504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.786018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGG TCTTCATCGG CATCGGCGGC AATCTGGGCG ATGCACGGGG CATCTGCCTG 
GGGGCCATCG AAGCCTTGAG GCAGCGCAGG GAAATCGACG TCCAAAAGGT CTCCTCGCTC
TACCGGACCA AGCCTTTGGG ACCGATCGTG CAGGAATGGT TCATCAACGC GGCTGTCCAG
TGCCGGAGCA GACTCGAGCC GGAAGCGCTG CTGGCGGTCC TGATGGAGAT TGAAGAGCAG
TTTGGCAGAA AACGCGATGT GAGATGGGGC CCGCGGACTC TGGATCTCGA TCTGCTGGCG
TTCGGCGACC GAATCGTATC GTTGCCCAAT CTGCGGATAC CCCACCCCGG GCTGCATGAA
CGCCTGTTCG TGCTGGTTCC TCTTGCCGAG ATTGCCCCGA AGTGGGTTCA CCCGGAGCTG
CGGATGACCG CCGAGGACCT GTTGAAGCGA TTGTCCGGCG CCGCGACCGA CCGGGAAATA
TGGCGATTGG AATAA
 
Protein sequence
METVFIGIGG NLGDARGICL GAIEALRQRR EIDVQKVSSL YRTKPLGPIV QEWFINAAVQ 
CRSRLEPEAL LAVLMEIEEQ FGRKRDVRWG PRTLDLDLLA FGDRIVSLPN LRIPHPGLHE
RLFVLVPLAE IAPKWVHPEL RMTAEDLLKR LSGAATDREI WRLE