| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0049 |
|---|
| Symbol | |
|---|
| ID | 4460989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 64811 |
|---|
| End bp | 65401 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700801 |
|---|
| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| Protein accession | YP_844187 |
|---|
| Protein GI | 116747500 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA GTGATCTTTC ACGTCAGAGC CTCACCAATC TGCCCAATAT CCTGACCTAC
ATCAGGATGG CCACGATACC GGTCATAGTG GTTCTGCTCA CCCCCCCGGC GTCCATGAAT
TCCTCGAACC TGGCTTTCCT GCTTTACGTG CTTGCCTCGA TAACCGACTA TCTGGACGGC
ATTCTGGCAC GCCGCCGCAA TCTCGTGACT TCCGTCGGCA AGCTCCTGGA CCCTCTCGCG
GACAAACTGC TCACCTCCGC CGTGCTGATC ATGCTTATCC CGCTGGGCAA GGTTCAGGCC
TGGCTCGTTT TTCTCATTAT CGGACGAGAG CTCATCATCA CGGGACTGAG GTCCATTGCC
GCCGGCCACG GCCTCATCCT GAACGCGAGT CGCATGGGGA AGAACAAGAT GGTGTCTCAA
ACCATCGCGC TGATCTTTCT CCTGCCTTCC GTTCCGCGAA TCGACTGGAT GCTGGACTAT
GCGGGGCTGT TTTTCCTTTG GGTTTCCGTC GTTCTCGGTT ACTGGTCCGC GATGGATTAC
TTCTCTCATT TTTACCGGGA AGCAAAGCGT CGCAGTCAGT CCAAGGAATG A
|
|---|
| Protein sequence | MNRSDLSRQS LTNLPNILTY IRMATIPVIV VLLTPPASMN SSNLAFLLYV LASITDYLDG
ILARRRNLVT SVGKLLDPLA DKLLTSAVLI MLIPLGKVQA WLVFLIIGRE LIITGLRSIA
AGHGLILNAS RMGKNKMVSQ TIALIFLLPS VPRIDWMLDY AGLFFLWVSV VLGYWSAMDY
FSHFYREAKR RSQSKE
|
|---|
| |