Gene Sfum_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0046 
Symbol 
ID4460986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp61277 
End bp62605 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content60% 
IMG OID639700798 
Producthypothetical protein 
Protein accessionYP_844184 
Protein GI116747497 
COG category[R] General function prediction only 
COG ID[COG2403] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAA AAGTCATCAT CGTGGGCGCC GCGGGACGGG ATTTTCACAA TTTCAACGTC 
TACTTCAAGA ACAATCGCCG TTACCGGGTG GTCGCATTCA CCGCGGCCCA GATCCCAAAC
ATCGAAAGCC GGCTGTTTCC TCCCGAGCTT TCAGGCGAGC ACTATCCTGA AGGTATTCCC
ATCTATCCGG AAGCCGACAT GGCCAGACTG ATTCGCGAAC ACCGGATCGA TCTCGTGGCG
TTCTCCTACA GCGACGTCGC GCACGTGGAC GTGATGCACC GGGCATCCCT GGCCATGGCC
GAAGGGGCGG ATTTCATCCT CCTGGGGGCC ACCTACACGA TGCTCAAGTC CCGCAAACCG
GTCATTGCCG TCTGCGCGGT TCGGACCGGG TCGGGAAAGT CCCAGACCAC GAGAGAGATT
TGCAGAATTT TGCAAAATCT GGGCAAGAAG GCCGTTGTCG TGAGGCATCC GATGCCTTAT
GGGGATCTGC GCAGCCAAAT TGTGCAGAGG TTTGCGAGCC GAGAAGACAT CGACGTCAAT
CAGTGCACCA TCGAGGAGCG GGAAGAGTAC GAACCCCTGG TCGATCGGGG GATCGTGGTC
TATGCGGGAA TCGATTACGC CCGCATCCTG GAACGGGCGG AGTCCGAATC CGAAATCATC
ATCTGGGACG GCGGAAACAA CGACACGCCG TTTTTTTCCC CGGATTTGCA TATCGTGGTC
TTCGATCCGC ACCGTCCCGG TCATGAGCTT CTCTACTACC CGGGCGAAAC CAACCTGATC
ATGGCCGATG TGGCCATCAT CAACAAAGTG GATACGGCAC TTCCCGAAAA CATCGAGTCC
GTGCGGGAAA ATATCGGGAA ATTTGCCCCC CGCGCGGAGA TCATCCTGGC CGAGTCTCCG
GTGACGGTGT CCGATCCCCG GCGGGTGCGC GGCAGCAGGG TCCTGGCGGT GGAAGACGGT
CCCACGCTCA CCCACGGCGG GATGCCGTTC GGGGCGGCAA CCATAGCGGC CCGCAAGTAC
GGCGCCGCCG AGATCGTCGA TCCTCATCCT TATGCCGTGG GAACCATTCG TGAAGCCCTG
TTGCAGTATC CGCACATCGG CGCCGAGCTC CCCGCGATGG GGTACGGCGA ACGCCAGATG
CGGGACCTCG AAGCCACCAT CAATGCCGTG GATTGCGATC TCGTCCTGGC GTCGACTCCC
GTCGACCTGA GCGGTCTTCT GTCCATGAAC AAGCCGACGT TGCGCGTTCG TTATGAATAC
AAGGATCATG GTCGCCCGGG GCTGGAAGAA GTGCTGACGC GCAGGCTGGT CGAATCGGGC
ATCCTCTGA
 
Protein sequence
MVEKVIIVGA AGRDFHNFNV YFKNNRRYRV VAFTAAQIPN IESRLFPPEL SGEHYPEGIP 
IYPEADMARL IREHRIDLVA FSYSDVAHVD VMHRASLAMA EGADFILLGA TYTMLKSRKP
VIAVCAVRTG SGKSQTTREI CRILQNLGKK AVVVRHPMPY GDLRSQIVQR FASREDIDVN
QCTIEEREEY EPLVDRGIVV YAGIDYARIL ERAESESEII IWDGGNNDTP FFSPDLHIVV
FDPHRPGHEL LYYPGETNLI MADVAIINKV DTALPENIES VRENIGKFAP RAEIILAESP
VTVSDPRRVR GSRVLAVEDG PTLTHGGMPF GAATIAARKY GAAEIVDPHP YAVGTIREAL
LQYPHIGAEL PAMGYGERQM RDLEATINAV DCDLVLASTP VDLSGLLSMN KPTLRVRYEY
KDHGRPGLEE VLTRRLVESG IL