Gene Sfum_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0044 
Symbolaat 
ID4460984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp59426 
End bp60130 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID639700796 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_844182 
Protein GI116747495 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.877978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.737015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTT TCCGACTGAC GGAAGAGTTG ATTTTTCCGC CGAGCTACCT TGCGGAGCGG 
GACGGCCTGC TGGCGGTGGG CGGTGACCTT TCCGCGGAGC GGTTGCTGCT CGCCTACCGA
CAGGGCATAT TCCCCTGGTA CACCGAGAAA ACCCCGATTC TGTGGTGGTC CCCGGACCCC
CGCCTGGTCC TCTTTCCCGC CGAATTGAAG ATCTCGATCA GCCTGCGCAG GGTTTTGAGG
AAGAACGTCT TCTCGGTTAC TTTCGACAGG GCTTTTGCGG ATGTGATCCG GCGATGCGCC
GAGGTGCGCA GGGCCAGGGA CGACAGTACC TGGATCGTGC CCGGGATGGT GACGGCCTAT
TCCCGGCTGC ATCGGCTGGG GTATGCCCAT TCGGTGGAGA GTTGGCACGA AGGTGAACTG
GTCGGGGGAC TCTATGGAGT GGCCCTTGGG CGGGTCTTCT ATGGAGAATC CATGTTCACG
AGGAAAACCG ATGCGTCCAA GGTGGCCCTG GTGCATCTGG TGGACCTTCT GACTCGTGGC
GGCTTCCAGT TGATCGACTG CCAGGTGACC ACGGCTCACC TTCAGAGCAT GGGCGCGCGT
GAAATCTCGC GGCGCAGATT CCTGACGCTG CTTGCCGAGA ATATCCCGGA GGTGGTGCAC
GGGGAAAGCT GGGAAGGAGA AAGCTGTTGT GGAAAGCGCC CTTGA
 
Protein sequence
MPVFRLTEEL IFPPSYLAER DGLLAVGGDL SAERLLLAYR QGIFPWYTEK TPILWWSPDP 
RLVLFPAELK ISISLRRVLR KNVFSVTFDR AFADVIRRCA EVRRARDDST WIVPGMVTAY
SRLHRLGYAH SVESWHEGEL VGGLYGVALG RVFYGESMFT RKTDASKVAL VHLVDLLTRG
GFQLIDCQVT TAHLQSMGAR EISRRRFLTL LAENIPEVVH GESWEGESCC GKRP