| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0043 |
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| Symbol | |
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| ID | 4460983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 57077 |
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| End bp | 59407 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639700795 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_844181 |
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| Protein GI | 116747494 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00409723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.565561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA GAGAGCTTGA AATAACGCTG TCGGCCGCGA TCAAGGAGGC CAAGACCAGA
CGGCATGAAT TCTTCACCCT GGAGCACGTG CTGTTCGCGA TGCTGCACGA TGTAACGGGA
CGGCGCGTCC TTTTCCATTG CGGAGCGGAC CTGGAGACGT TGAAAGGGAA GCTGCTCAAG
TTTTTTGAGG AGCGGGCGGA GAAGCTTCCG GAGGGCATCG ACCAGGATCC GATTCAGACC
TTGAGCGTTC AGAGGGTGTT GCAGCGGGCG GTGATGCACG TGCACGGGGC CGAAAAGAAG
GAAGTGGATG CCGGGGACAT ACTGGCCGCG ATGTTCTACG AAGAGAACTC TTACGCCGTC
TATTTCCTGA AGTCCGAGGG CGTGAGCCGC CTGGATGTGC TGAGCTATAT TTCGCACGGC
ATCTCCAAAG TCGGGTATCC CGAAGAGGAT GAGGGGGCCC GGGACGAGCC TGCACACGAG
GTCGCGCCCG GGGAGGAAGG CGAACCGCGG AGGACGTCGG CCCTGGAAAG CTTCGCCGTG
AACCTCATCG AAAAGGCTGC CCAGGGACGG ATCGATCCAC TCATCGGGCG TGAGGAAGAG
ATCCTTAGGA CGCTCCAGAT CCTTGGACGC AGGAGCAAGA ACAACCCGAT CTTCGTCGGA
GACCCCGGAG TGGGGAAGAC GGCGATTGCC GAGGGGCTGG CGCTGAAAAT CCAGAAGGGA
GAGGTGCCCG AGGTCTTCCA GAACATAGAG ATTTTCGCCT TGGACATGGG AGCGCTTCTT
GCGGGCACGA AGTTCCGGGG CGATTTCGAG GCGCGCCTCA AAAGCGTGAT CCAGGAGCTC
AAGAAGAAGG AAGGCGCGAT CCTGTTCATC GACGAGATCC ACACGGTGGT GGGGGCTGGT
GCGACGAGCG GCGGCTCGAT GGACGCCTCC AATATCCTCA AGCCCGTTCT GGTCACCGGA
GGGCTGCGGT GTATCGGGTC CACCACCTAT GAGGAATACA AGAACCACTT TGAGAAAGAC
CGTGCGCTGA GTCGCCGGTT CCAGAAGGTC GAAATCCACG AGCCCTCCGT GGAGGAGACC
TACCGAATCC TGCTGGGACT GCGGCAATAC TACGAGAAGC ACCATGGGAT CCGGTACACG
GACGCCGCAT TGAGGGCGGC GACGGAACTC TCCAACCGGT TCATCAACGA TCGCTATCTG
CCGGACAAGG CCATCGACGT CATTGACGAG ACGGGGGCCA GCCTGCGGCT GAAGAAAGAC
CGGCGGGTGC GGCGAGTGGT CGGGCCGAAG GACATCGAGC TGGTGGTGGC CAGGATCGCG
AAGATTCCTC CCCGGTCGGT CTCCGCCTCC GACCAGTTGC GGCTTCACAG CCTGGACGAG
GAGCTCAAGG GCCAGGTGTT TGGCCAGGAC GGGGCCATCG ATGTCCTGGT CAAGGCGATC
AAGCGGTCTC GAGCGGGTCT GAGGATTCCG GAGCGGCCCA TCGGGTCTTT CCTTTTCATC
GGGCCTACGG GAGTCGGAAA AACCGAAGTC GCCAAGCAAC TGGCACGCAT CCTCGGGGTC
AATTTCCTGC GCTTCGATAT GAGCGAATAT ATGGAGAAGC ACACGGTCGC ACGGCTGATC
GGCGCGCCTC CGGGGTATAT CGGATTCGAC CAGGGAGGTC TGCTGACCGA CGCCATCCGC
AAGCAGCCTT ACACGGTCCT GCTGCTGGAC GAGATCGAGA AGGCCCACCC CGACCTTTTC
AGCATTCTCC TGCAGGTGAT GGACCATGCG ACGCTCACGG ACAACAACGG CAAGAAGGCG
GATTTTCGCA ACGTCATCCT GCTCATGACC TCAAACGCCG GGGCGCGGGA GATGAGCATG
TCGTCCATCG GTTTCGGCGG AGGCACGGTG GAACCCGACC ACCGCGCGAT CAAGGGCCTG
AAGGCCGTGG AGAGCCTCTT CAGCCCGGAA TTCCGCAATC GCCTGGACGG GATCGTCCTG
TTCAACGGTC TGAACCTCGA GATCATGGAG CAGATTGTCG ACAAGTTCGT CGTCGAGATG
GAAACGCAAC TGGGCGAGAA GAAGATCCGC ATGGAATTGA GCGCCGAGGC GAGGCGCTGG
CTGGGCGGGC AGGGCTACGA CGTGACGTTC GGAGCACGGC CGCTTGCGCG GTTGATCCAG
ACCGAAGTCA AGGATGTGCT GGCTGACGAA ATTCTTTTCG GGAGGCTCAT GCACGGGGGC
CGCGTGCAGG TCTTCAGACC TGACGAGGCC GTACCGGCAG GCGAGGAGAT TCTGAAGACG
TCCAACCTGG TCTTCGTTTT TCCGGACGTT CCGGGCGTGC CTGCGGCATA G
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| Protein sequence | MINRELEITL SAAIKEAKTR RHEFFTLEHV LFAMLHDVTG RRVLFHCGAD LETLKGKLLK
FFEERAEKLP EGIDQDPIQT LSVQRVLQRA VMHVHGAEKK EVDAGDILAA MFYEENSYAV
YFLKSEGVSR LDVLSYISHG ISKVGYPEED EGARDEPAHE VAPGEEGEPR RTSALESFAV
NLIEKAAQGR IDPLIGREEE ILRTLQILGR RSKNNPIFVG DPGVGKTAIA EGLALKIQKG
EVPEVFQNIE IFALDMGALL AGTKFRGDFE ARLKSVIQEL KKKEGAILFI DEIHTVVGAG
ATSGGSMDAS NILKPVLVTG GLRCIGSTTY EEYKNHFEKD RALSRRFQKV EIHEPSVEET
YRILLGLRQY YEKHHGIRYT DAALRAATEL SNRFINDRYL PDKAIDVIDE TGASLRLKKD
RRVRRVVGPK DIELVVARIA KIPPRSVSAS DQLRLHSLDE ELKGQVFGQD GAIDVLVKAI
KRSRAGLRIP ERPIGSFLFI GPTGVGKTEV AKQLARILGV NFLRFDMSEY MEKHTVARLI
GAPPGYIGFD QGGLLTDAIR KQPYTVLLLD EIEKAHPDLF SILLQVMDHA TLTDNNGKKA
DFRNVILLMT SNAGAREMSM SSIGFGGGTV EPDHRAIKGL KAVESLFSPE FRNRLDGIVL
FNGLNLEIME QIVDKFVVEM ETQLGEKKIR MELSAEARRW LGGQGYDVTF GARPLARLIQ
TEVKDVLADE ILFGRLMHGG RVQVFRPDEA VPAGEEILKT SNLVFVFPDV PGVPAA
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