Gene Sfum_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0042 
Symbol 
ID4460982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp56834 
End bp57076 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content52% 
IMG OID639700794 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_844180 
Protein GI116747493 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00150413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.403792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGAG TTCTGCTTCA CAACGACGAT TATACTACAA TGGAGTTCGT AGTCGAAATC 
CTTCAGTCGG TGTTCCACAA ATCTCCGTCG GAGGCCACCC GTATCATGTT GCTGGTCCAC
AAATCGGGTA CCGGCGTGTG TGGGGTGTTC ACGGCCGAAG TGGCGGAGAC GAAGGTGGAG
TTGGTGCATC ACCTGGCGCG AAAAAACGGA TTTCCGCTGC AATGCAGCAT GGAAGAAACT
TAG
 
Protein sequence
MYRVLLHNDD YTTMEFVVEI LQSVFHKSPS EATRIMLLVH KSGTGVCGVF TAEVAETKVE 
LVHHLARKNG FPLQCSMEET