| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0035 |
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| Symbol | |
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| ID | 4460975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 49011 |
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| End bp | 49598 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639700787 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_844173 |
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| Protein GI | 116747486 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0057106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.285517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTCA CACGACGTGA GTTCCTTTTG ATCTCCGGCA CCATGGGGGC CGGTCTGGCG
CTGTCGTCTC TGGGAGTCGA CATGCGCCCG ATCATGGCCC ACGCGGAGGA ACTCAGTAAG
ATCGAGAAGG TGAAGAGCGC CAAGCAGACC TACTCGCTCT GTTACTATTG TTCGGTAACG
TGCGGGTTGA TTTGCAGCAC CGATCAGAAA ACCGGCAAAA TCATCAACAT CGAAGGGGAT
CCGGACCATC CCGTCACGGA AGGATCGCTT TGTGCGAAAG GTGCGGCAAG CCTTCAGATG
TCGGCCCGCA ACGAGCATCG TTTGACCAAG GTCCTCTATC GCAAGCCCGG CGGCGACAAG
TGGGAACCCA AGACGATGGA TTGGGCTCTG ACCGAGATCG CAAAGAGAAT CAAAGCCACC
CGCGACAAGG ACTTCATGGT CAAGAACGCA AAAGGACAGG TCGTCAACCG GTTGGAGAGC
ATCTCGCATC TGGGCAGTTC CAAGCTGGAC AATGAAGAGT GCTGGATGGT GACCGCCGCG
GTGAGGGCAC TCGGCCTCGT CTACATCGAC CACCAGGCCA GAGTCTGA
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| Protein sequence | MGVTRREFLL ISGTMGAGLA LSSLGVDMRP IMAHAEELSK IEKVKSAKQT YSLCYYCSVT
CGLICSTDQK TGKIINIEGD PDHPVTEGSL CAKGAASLQM SARNEHRLTK VLYRKPGGDK
WEPKTMDWAL TEIAKRIKAT RDKDFMVKNA KGQVVNRLES ISHLGSSKLD NEECWMVTAA
VRALGLVYID HQARV
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