Gene Sfum_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0025 
Symbol 
ID4461336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp38113 
End bp38562 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID639700777 
Productferric uptake regulator family protein 
Protein accessionYP_844163 
Protein GI116747476 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.344249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.157034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCC AATGCGATTA TTCCGATCTT CTGAAACGCT CGGGAGTGAG CCTGACGGTT 
CACCGGTTGA GGGTGCTGGA GGTCATCGGG GACAGCCCGT GTCCGCTGAG TCACCGGGAG
ATTCACCGGA CGCTGAAACG ATCCCGCGTC GTGGACCGGG TGACGGTCTA CCGCATACTC
GATCTTCTCG TGGACAAGGG GGTCGTCCAG CGGATCAGCT CGGGCGACAG GGGTTTCCGG
TACGGCCTGG CCCCCAGCTC GAACCATCCC TCCCATCATC ATTTTTTCTG CAGCGTTTGC
GGGAACATGC AATGTCTCGA TCCCGGTGCG CTTCCCATCG ATTTGCAGGC ACTGCAACGG
TCCTGCGCGT CCTTGATCCG CAACGTCGAG GTGCGCCTGG ACGGGATATG CGGGAACTGC
CTGGAGAATC GCGGCGCCAA GGATAACTGA
 
Protein sequence
MCRQCDYSDL LKRSGVSLTV HRLRVLEVIG DSPCPLSHRE IHRTLKRSRV VDRVTVYRIL 
DLLVDKGVVQ RISSGDRGFR YGLAPSSNHP SHHHFFCSVC GNMQCLDPGA LPIDLQALQR
SCASLIRNVE VRLDGICGNC LENRGAKDN