Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0024 |
Symbol | |
ID | 4461335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 37084 |
End bp | 38022 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639700776 |
Product | periplasmic solute binding protein |
Protein accession | YP_844162 |
Protein GI | 116747475 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.178577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATC CTGCGAGAGT TGTCGCAAAA CTTCTGCTTG GTTTGAGCCT GGTTTTTGCG GTCGCCGGGG CTCCGGCCGC CGTCGGCGCC GCGGAGGCGA AAGGTCGTCT GGAGGTCACC GTCAGCATTC TGCCTCAGAA GTATTTTGTG GAGAAGATCG GCGGGGACCT GGTTTCCGTC ACCGTGATGG TGGAACCGGG AGCGGAACCG CACGTCTACG ATCCCAAGCC GCAGAGGATG ACGGGGCTTA CCCGGTCGAA AATCTATTTT GCCGTCGGCG CGCCGTTCGA GGACGTCTGG CTCGATCGGT TCGCCGCGGC CAATCCTAAA ATGCGCATCG TCCGGACCGA TGCCGGAATC GCAAAGCTTT CCATGGAACA CGACCATGCT ACCCCGGAGA AGGAAGAGGC GCACACGCAT CCGGAGTCCG CTGCGAGGGA GCATTCTCAC GGCGGGGAGG ACCCTCACGT GTGGACTTCC CCTCCGCTGG TGATGATCCA GGCGCGGCAC ATCCTCGCCG GGCTGGTCGA GGCGGATCCC GCTCACCGGG GGGCCTACGA GACGAACTAC CGGAAGTTCG TGGAGGAACT GGTCGAGCTG GATCACTTTC TACTGAACCT GTTTCAAGAC AGGCCGAAAG GGGAGTTCAT CGTCTTTCAT CCGGCCTGGG GCTATTTTGC CGAAGCCTAC AACCTCCAGC AGGTGTCCAT CGAAATCGAA GGCAAGGAAC CGAAGGCGGC CGATCTGCAG CGGTTGATCG AACAAGCGCG GAAACGCAGG GTCGGAACGG TTTTCGTGCA GCCGCAGTTT TCCGACAGGA GCGCCAAGGT CATTGCCGAG GCCATCGGCT CGCGGGTGGA ATTTGCCGAT CCGATGTCGG CCGACTGGGA CAGGAACCTG CGGGAATTCG CGGGGAAAAT CCACGCATCA CTGCACTGA
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Protein sequence | MTHPARVVAK LLLGLSLVFA VAGAPAAVGA AEAKGRLEVT VSILPQKYFV EKIGGDLVSV TVMVEPGAEP HVYDPKPQRM TGLTRSKIYF AVGAPFEDVW LDRFAAANPK MRIVRTDAGI AKLSMEHDHA TPEKEEAHTH PESAAREHSH GGEDPHVWTS PPLVMIQARH ILAGLVEADP AHRGAYETNY RKFVEELVEL DHFLLNLFQD RPKGEFIVFH PAWGYFAEAY NLQQVSIEIE GKEPKAADLQ RLIEQARKRR VGTVFVQPQF SDRSAKVIAE AIGSRVEFAD PMSADWDRNL REFAGKIHAS LH
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