Gene Sfum_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0021 
Symbol 
ID4461332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp34935 
End bp35171 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content52% 
IMG OID639700773 
Producthypothetical protein 
Protein accessionYP_844159 
Protein GI116747472 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.055536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.167537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATTTA AAGATCTCGT TGAATATCTG GTCACATCGC TTGCGGATCA CCCGCGGGAA 
GTGGTTCTTA CGGAACGGGA AGAAGACGAC ACGGTGATAC TGGAATTGAA GATCTCCACC
GAGGACCTCG GTCGGATCAT CGGCAAGAAC GGCAACACGA TCAACGCTAT TCGGACAGTG
ATTCAGACGG CGGCTTCGAG CACGAAGAAG AAAGTGAAAC TGGACGTGCT CAGCTGA
 
Protein sequence
MAFKDLVEYL VTSLADHPRE VVLTEREEDD TVILELKIST EDLGRIIGKN GNTINAIRTV 
IQTAASSTKK KVKLDVLS