| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0015 |
|---|
| Symbol | |
|---|
| ID | 4460164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 26434 |
|---|
| End bp | 27054 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639700767 |
|---|
| Product | 2-oxoglutarate synthase |
|---|
| Protein accession | YP_844153 |
|---|
| Protein GI | 116747466 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.439492 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA AGCATGGCAA CAGCGTGAAG GCGGCGGTCG CCGTCCGAAA GGAGATTATC
ATCACCGGTT TCGGCGGTCA GGGAATCGTT CTGGCCGGGC AGATCGTCGG CAAGGCCGCC
GGGCTGCGGG ACCGCAAGCA GAGCACTCTG ACCCAATCCT ACGGCCCCGA AGCCCGGGGC
GGTGCGTGCA GCGCTCAGGT GATCATCTCC GATCAGGCCA TTCACTACCC TTACGTGCGG
AAGCCCGACA TCCTGATCTG CATGTCCCAG GGCGGTTTCG AAAAGTACGG GGGGCTCCTG
GGGGAGAATT CCATCCTGAT CGTGGACCAG GACCTGGTCA ACCCTCCGGA AGCCCGGTGC
GCCGCGTTCT TTTCCATCCC CGCCACCCGG CTGGCCGAAG AGATGGGCAG GAAAATGATG
GCCAACATCG TGATGCTCGG GTTTTTCACC GCGGTTGCCG GCGCGATCAG TACGGAGGCC
GCCCGACAGA CCGTGACGGA ATCCGTCCCC AAAGGCACCG AAGAGCTCAA CCTTGCCGCG
TTCAACAAGG GCTACGACTA TGGCGCCGCG GTCCTCAAGG GCCGTCAGAA GAAGGCCGAA
GGAAAGAAAG GAGCCCTGTG A
|
|---|
| Protein sequence | MTTKHGNSVK AAVAVRKEII ITGFGGQGIV LAGQIVGKAA GLRDRKQSTL TQSYGPEARG
GACSAQVIIS DQAIHYPYVR KPDILICMSQ GGFEKYGGLL GENSILIVDQ DLVNPPEARC
AAFFSIPATR LAEEMGRKMM ANIVMLGFFT AVAGAISTEA ARQTVTESVP KGTEELNLAA
FNKGYDYGAA VLKGRQKKAE GKKGAL
|
|---|
| |