| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0006 |
|---|
| Symbol | |
|---|
| ID | 4460155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 6663 |
|---|
| End bp | 7736 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639700759 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_844145 |
|---|
| Protein GI | 116747458 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.157738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAAAGA GCGCGCATCG GGCGGGGGGG CCGCAAGAGG AGCCGTCGGC GGTCCCTCTT
CTCCGGAAAG GGAGTACGGA ACACCCCGCC GCCTCCACGA AGGGCATTCT CGAGATTGCA
GCCGATGTAT TGCGCATCGA ATCGGAAGGC ATTCTCCATC TTCTGGATCA CATCAGCGAG
AGCTTCGCCA GGGCGGTTCT GTGGATCTAC GAGGCCGGCG GCCGAATCAT CGTAACGGGC
ATCGGCAAAT CCGGCATCGT CGGCCGCAAG ATAGTGGCCA CCCTGAGCAG CACGGGGACG
CCCGCCCTGT TCATTCATCC GGTGGAGGCC ATGCATGGAG ACCTCGGCAT GGTGCGTGCG
GGGGACATCG TTCTCGCCCT GTCCAACAGC GGTGAAACCG ACGAGTTGAA CATCATCCTG
CCGAGCCTCA AGAATATCGG CACCCGCATC ATCGCCTTCA CGGGGGATAC GTCGTCGACC
CTCGCGCAAT ACAGCGATCT TACCGTCTAC ACCGGGGTTC CGAGGGAAGC CTGCCCGATG
GGGCTGGTTC CGACGGCAAG CACCACCGCG ATGCTCGCCA TGGGGGACGC CCTGGCCGTT
GCGCTGCTCA GGCTCCGCAA CTTCCAGGAA CGCGACTTCC ACCGGTTTCA TCCCGGTGGG
CACCTGGGCG AACGGCTTCA GGTGCCCTTG CGCGACGTGA TGCTCAAGGG CGACGAGATC
CCCGCCGTGC CTGCCGCCAC TCCCGTGCCG GCGGCGCTGG CCGAGATGAG CCGGAAGGGA
CTCGGAGCGA CGCTCATCCT CGACGAAGAC AAACGGCTGC AGGGTATCTT CACCGACGGC
GATCTGCGCA GGACCCTGAA CAGCTGTTCG AATTTCACGG AAAAGCGCAT TTCCGAGGTG
ATGACTCCCG GCCCGCGCAC CATTTCGTCG CATCGTTCGG TGGCCGACGC CCTCGAGTTG
ATGGAAAGGC ACCTGATCAC CGTGCTTCCG GTGGTGGACG AAAACCGGAA CGTCGAGGGA
ATTCTTCATC TGCACGATCT GCTCGGCAAG GGCAGAATCC GATTCTCCCG CTGA
|
|---|
| Protein sequence | MTKSAHRAGG PQEEPSAVPL LRKGSTEHPA ASTKGILEIA ADVLRIESEG ILHLLDHISE
SFARAVLWIY EAGGRIIVTG IGKSGIVGRK IVATLSSTGT PALFIHPVEA MHGDLGMVRA
GDIVLALSNS GETDELNIIL PSLKNIGTRI IAFTGDTSST LAQYSDLTVY TGVPREACPM
GLVPTASTTA MLAMGDALAV ALLRLRNFQE RDFHRFHPGG HLGERLQVPL RDVMLKGDEI
PAVPAATPVP AALAEMSRKG LGATLILDED KRLQGIFTDG DLRRTLNSCS NFTEKRISEV
MTPGPRTISS HRSVADALEL MERHLITVLP VVDENRNVEG ILHLHDLLGK GRIRFSR
|
|---|
| |