Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1716 |
Symbol | |
ID | 4462676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1866734 |
End bp | 1867435 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639700735 |
Product | 30S ribosomal protein S4e |
Protein accession | YP_844122 |
Protein GI | 116755004 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1471] Ribosomal protein S4E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.028053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACAGGA AAAGAGTCAC GATACCCAGA AGCTGGCTAA TACCAAGGAA GACCAGCAAG TGGATAGCAA CGCCCAGACC TGGTCCGCAC TCAGCTGAGG AGAGTCTGCC TCTGATGGTC GTTGTCAGAG ATCTTTTAAA GCTGGCAGAT AACGCGCGCG AGGTCAAGAG GATCCTCCAC GAGGGCGGGG TGCTGGTGGA TGGGACTGTG AGAAGGGATG CGAGGTTTCC TGTGGGACTC TTCGATGTCA TAACAGTTCC CGCTCTCAAC AAACAGTACA GAATGGTCAA GAGCACGAAG GGGTACTTTG TGCTCATAGA GATCCAGCCA GATACGCCAA GAAAGCTTGT CAGGGTAGAG AACAAAACCA CCCTTAAGGG CAACAGGATG CAGCTGAACC TCAGCGATGG ATCAAACATA ATCGCAGAGG GTGATGTCGG GACTGGCGAT TCGCTGCTGA TCTCGCTGCC AGAGAGGAGC ATCGAGGATA TCATAAAGTT CGAGGTCGGG AACCTGGCGA TGGTGACCGG TGGATCGCAC ACAGGAATGA CGGGTCGCAT CAAATCCGTG CAGATTGTGA GAAGCTCGAT GCCGAACAGG GTCACAATAT CTACGGATGA TGGGGATATA GAGACGATCA TCGACTACGT CTTCGTGATA GGCAGAGATG CGCCTGTTAT TGAGCTGGAG GCTGGAATAT GA
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Protein sequence | MHRKRVTIPR SWLIPRKTSK WIATPRPGPH SAEESLPLMV VVRDLLKLAD NAREVKRILH EGGVLVDGTV RRDARFPVGL FDVITVPALN KQYRMVKSTK GYFVLIEIQP DTPRKLVRVE NKTTLKGNRM QLNLSDGSNI IAEGDVGTGD SLLISLPERS IEDIIKFEVG NLAMVTGGSH TGMTGRIKSV QIVRSSMPNR VTISTDDGDI ETIIDYVFVI GRDAPVIELE AGI
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