Gene Mthe_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1716 
Symbol 
ID4462676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1866734 
End bp1867435 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content53% 
IMG OID639700735 
Product30S ribosomal protein S4e 
Protein accessionYP_844122 
Protein GI116755004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.028053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACAGGA AAAGAGTCAC GATACCCAGA AGCTGGCTAA TACCAAGGAA GACCAGCAAG 
TGGATAGCAA CGCCCAGACC TGGTCCGCAC TCAGCTGAGG AGAGTCTGCC TCTGATGGTC
GTTGTCAGAG ATCTTTTAAA GCTGGCAGAT AACGCGCGCG AGGTCAAGAG GATCCTCCAC
GAGGGCGGGG TGCTGGTGGA TGGGACTGTG AGAAGGGATG CGAGGTTTCC TGTGGGACTC
TTCGATGTCA TAACAGTTCC CGCTCTCAAC AAACAGTACA GAATGGTCAA GAGCACGAAG
GGGTACTTTG TGCTCATAGA GATCCAGCCA GATACGCCAA GAAAGCTTGT CAGGGTAGAG
AACAAAACCA CCCTTAAGGG CAACAGGATG CAGCTGAACC TCAGCGATGG ATCAAACATA
ATCGCAGAGG GTGATGTCGG GACTGGCGAT TCGCTGCTGA TCTCGCTGCC AGAGAGGAGC
ATCGAGGATA TCATAAAGTT CGAGGTCGGG AACCTGGCGA TGGTGACCGG TGGATCGCAC
ACAGGAATGA CGGGTCGCAT CAAATCCGTG CAGATTGTGA GAAGCTCGAT GCCGAACAGG
GTCACAATAT CTACGGATGA TGGGGATATA GAGACGATCA TCGACTACGT CTTCGTGATA
GGCAGAGATG CGCCTGTTAT TGAGCTGGAG GCTGGAATAT GA
 
Protein sequence
MHRKRVTIPR SWLIPRKTSK WIATPRPGPH SAEESLPLMV VVRDLLKLAD NAREVKRILH 
EGGVLVDGTV RRDARFPVGL FDVITVPALN KQYRMVKSTK GYFVLIEIQP DTPRKLVRVE
NKTTLKGNRM QLNLSDGSNI IAEGDVGTGD SLLISLPERS IEDIIKFEVG NLAMVTGGSH
TGMTGRIKSV QIVRSSMPNR VTISTDDGDI ETIIDYVFVI GRDAPVIELE AGI