Gene Mthe_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1709 
Symbolrpl18p 
ID4462669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1863780 
End bp1864289 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content55% 
IMG OID639700728 
Product50S ribosomal protein L18P 
Protein accessionYP_844115 
Protein GI116754997 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0341249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTACAG GACCGCGATA CAGGGTGCCC TTCAGGAGGC GGAGAGAGGG GAGGACCAAC 
TATCATGTCA GATACAGGCT TATCCTCTCC AGAAAGCCCA GGGTTGTTGT CAGGAAGGGC
AATGCAAACA TCACGATACA GTTGATCATC GCTGAGCTCA AAGGGGACAG GACGCTGCTC
ACAGTCAGCT CGAAGGAGCT CAGGAACTAC GGGTTCCAGC ACAGCACAGG CAACGTGCCT
GCAGCTTATC TTACAGGATT GCTGTTCGGC AAGAAGATGC TCGCACTGGG GTATAACGAG
GGCATACTCG ACATAGGTCT GCACTCGAAC TCCAGAGGGA GCAGGGTGTA TGCCGCCCTT
AAAGGAGTTG TTGATGCTGG AGTGGACGTG CCCCACAGCC CGGAGGTCTT CCCGGACGAT
TCAAGAATCC GTGGAGAGGT CATAAGGGAT TACACCGGAG TGGATGTGGT CTCACAGTTC
GAGGCCGCGA GGGAGAAGAT ACTGGGGTGA
 
Protein sequence
MATGPRYRVP FRRRREGRTN YHVRYRLILS RKPRVVVRKG NANITIQLII AELKGDRTLL 
TVSSKELRNY GFQHSTGNVP AAYLTGLLFG KKMLALGYNE GILDIGLHSN SRGSRVYAAL
KGVVDAGVDV PHSPEVFPDD SRIRGEVIRD YTGVDVVSQF EAAREKILG