Gene Mthe_1708 details

Gene Information

• Locus tag: Mthe_1708
• Symbol: rps5p
• ID: 4462668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 1863164
• End bp: 1863775
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639700727
• Product: 30S ribosomal protein S5P
• Protein accession: YP_844114
• Protein GI: 116754996
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0233488
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCAAGG GTTATGAAGA AGAGGAATGG ATACCGAAGA CCAGGCTCGG CAGACTTGTC 
TATGAGGGGC AGGTCACGAC GTTCGAGGAG GCGGTCAGGT CAGGTCTTCC CATCAAAGAG 
CACCAGATTA TAGATCTTCT GCTCCCTGGC CTCGAAGATG AGGTCCTGGA TATAACCATG 
GTGCAGAGGA TGACCGACTC CGGGCGAAGG GTGAAGTTCA GGACCACGGT CATAGTAGGG 
AACAGAGATG GATACATCGG CATAGGCCAC GGCAAGGACG TCCAGGTCGG CGGAGCCATA 
AAGAAGGGCA TAGAGAACGC AAAGCTCAAT GTGGTCAGGA TCAACAGGGG CTGCGGAAGC 
TGGGAGTGCG GCTGCGGCCA GGCGCACACT GTACCATACA AGGTATCTGG AAGCTCTGGC 
AGCGTCAGGA TATACCTCAT GCCCGCGCCC AGGGGTCTCG GACTGGCTGC AGGAGATGTG 
GCCAAGAAGG TCATGGAGAT GGCCGGCATA AAGGATGTCT GGACCAGGAC AGAGGGTTCG 
ACGAGAACGA CCCTGAACTT CGCCAAGGCG ACCTACAATG CGCTCCTTAA CACCATAACT 
GTGAGGTCTT GA 

 

Protein sequence

MIKGYEEEEW IPKTRLGRLV YEGQVTTFEE AVRSGLPIKE HQIIDLLLPG LEDEVLDITM 
VQRMTDSGRR VKFRTTVIVG NRDGYIGIGH GKDVQVGGAI KKGIENAKLN VVRINRGCGS 
WECGCGQAHT VPYKVSGSSG SVRIYLMPAP RGLGLAAGDV AKKVMEMAGI KDVWTRTEGS 
TRTTLNFAKA TYNALLNTIT VRS