| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1651 |
|---|
| Symbol | |
|---|
| ID | 4462647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1794234 |
|---|
| End bp | 1795619 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700670 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_844058 |
|---|
| Protein GI | 116754940 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCGG AACAGAACAG TTCCATAATG GATGCGCTGA GGGATATTGT TGGACCCAGA
GTCTCGAACT CGCTAGCCGA GCTCTGCTGC TACTCCTGCG ATGCATCTCA GGTATACGGC
CTTCCTGAGT GCGTCGTTCG ACCTCTGACG AGAGAAGAGG TATCCAGGAT TCTCAAGCTC
GCATACGAAT ACGAAATTCC CGTGACAGCC AGAGGCGCCG GCACCGGACT CGCTGGAGGC
GCTGTGCCTG TAAGAGGTGG CGTAGTTCTG GACATGTCCG GAATGAATAA AATCCTGGAG
ATTGATGTGG AGAACCTGCA GGTTCACGTA GAGCCTGGGG TTGTTGTTGA GCAGCTCAAC
AGAGCTCTCA GACCACACGG CTTCTTCTTC CCACCGAACC CGGGAAGCTC CAGCGTCTGC
ACGATAGGGG GGCTGATATC TAACAATGGA AGTGGCATGA GGTGCGTGAA GTATGGCACC
ACGAAGAGCT ATGTTCTGGA TCTTGAGGTC GTGCTGGCCG ACGGTACCGT TATTCGGACA
GGCTCTAAGG TCCTGAAGTC ATCCGCTGGT TATGATCTGA CGCGACTCAT GGTCGGGGCA
GAGGGTACGC TCGGAGTCAT AACAGCTGCC AGGCTCAGGA TCGCGCCTAT GCCGAAGAGG
CGGAGGCTGG TCATGGCCTC CTTTGAGAGC GCTGAGCTCG CAGGCATGGC CGTCGTGAAG
GCATTCTCCG CGGGCATCGT GCCGTCTGCA TGCGAGATAC TGGACAGCAC GACTGTAAAG
GTTCTCAGGC GATGCGATCC GAACATAGTG CTTCCAGACG GTGATATCTT GCTCTTCGAG
GTCGATGGAA CAGATCTATC GACATCAGAG GATGCGAAAA GGGTATCTGA GGTCTGCGCT
GGCCTGGCAC AGAGCATCAG AGTCGCATCC GATCAGAGGG AGATGTCTGA GATATGGGCT
GCCCGGGAGC TGGTCGGCGC CGCGATCTCC AGGCTCGATC CATCGAAGAG TCGCATCTAT
GTTGGAGAGG ATGTGGGGGT TCCGATGAAG GAGATTCCCA ATCTCATGAG AAAGGTCCAG
GAGATATCGG ACAGTACCGG CATCCCGGCG ATGAAGTACG GCCATATCGG CGATGGCAAC
CTTCACGTCG CATGGTTCAT AGATGTGAGC AGTGAAGAGG AATGGAGCAG GCTCAGGAGA
GCAGCGGACA TGATCCACAG AGCTGCCATA GAGCTCGGTG GGACCGTGAG CTCTGAGCAC
GGAATCGGCG GGGCGAGAGC TGGATACATG GAGATGCAGT GGGGGCCAGC TCTGGAGATC
ATGCGCGCGA TCAAACGCGC TCTGGATCCG AAGGGGATAC TGAACCCGGG CAAGCTGGGT
CTGTGA
|
|---|
| Protein sequence | MSPEQNSSIM DALRDIVGPR VSNSLAELCC YSCDASQVYG LPECVVRPLT REEVSRILKL
AYEYEIPVTA RGAGTGLAGG AVPVRGGVVL DMSGMNKILE IDVENLQVHV EPGVVVEQLN
RALRPHGFFF PPNPGSSSVC TIGGLISNNG SGMRCVKYGT TKSYVLDLEV VLADGTVIRT
GSKVLKSSAG YDLTRLMVGA EGTLGVITAA RLRIAPMPKR RRLVMASFES AELAGMAVVK
AFSAGIVPSA CEILDSTTVK VLRRCDPNIV LPDGDILLFE VDGTDLSTSE DAKRVSEVCA
GLAQSIRVAS DQREMSEIWA ARELVGAAIS RLDPSKSRIY VGEDVGVPMK EIPNLMRKVQ
EISDSTGIPA MKYGHIGDGN LHVAWFIDVS SEEEWSRLRR AADMIHRAAI ELGGTVSSEH
GIGGARAGYM EMQWGPALEI MRAIKRALDP KGILNPGKLG L
|
|---|
| |