Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1619 |
Symbol | rps4p |
ID | 4462196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 1762555 |
End bp | 1763106 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639700637 |
Product | 30S ribosomal protein S4P |
Protein accession | YP_844026 |
Protein GI | 116754908 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.630311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGATATC CTGGCAAGAG CCACAAGACA TATGATCGGC CTCGAAAGCC ATGGGAAGCA GACAGGATGG CCAATGAGGT CGAGCTCATA AAGACCTACG GGCTGAGGAA CAAGCGCGAG CTCTGGAAGG CTGAGAGCAT TCTAAGAAAG TACAGGCGCG TTGGGAGGAT GCTTCTCGCA TCCAAGGCTC GTGGCGAGGC CAGAGCCGAT ATAGAGGCTG CTGCGGTTAT CAATAGACTG TCACGCTTCG GCATCCTGAA GGATGGTGCA GATCTCGATG CCATACTCTC ACTGAAGATC ACAGATATCC TGGAGAGGCG GCTGCAGACA CAGGTCTACA GACAGGGTCT CGCAAACACG ATACGACAGG CGAGACAGTT CATAACCCAC GGGCACATCC AGGTGGCAGG TCAGAGGGTG ACCGTCCCGA GCTACCTGGT GAAGAGAGGG GACGAGATGA CCATCGATTA CTATGCAGGA TCCCCGCTCG CCAGAGAGGG GCATCCGGAG AGGTCATCTA AGATCGTCGC CAGGACTGGA GGGTCGGCAT GA
|
Protein sequence | MGYPGKSHKT YDRPRKPWEA DRMANEVELI KTYGLRNKRE LWKAESILRK YRRVGRMLLA SKARGEARAD IEAAAVINRL SRFGILKDGA DLDAILSLKI TDILERRLQT QVYRQGLANT IRQARQFITH GHIQVAGQRV TVPSYLVKRG DEMTIDYYAG SPLAREGHPE RSSKIVARTG GSA
|
| |