Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1588 |
Symbol | |
ID | 4461916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 1721456 |
End bp | 1721986 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639700609 |
Product | phosphodiesterase |
Protein accession | YP_843998 |
Protein GI | 116754880 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.398386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATAG GTATCATGTC CGACTCTCAC GATAACTTTC GGGGCATCAA GGAAGCTCTG GGCGTATTCT CTAAGAGAGA TGTTAAGCTG GTGCTGCACG CTGGAGACGT GATCGGATCC GGGAACGCGT ATCTCTTCGA TGGCTACGGC ATTCCTGTGA GACTAGTCTA CGGGAACAAC GACGGAGACC GCGTCGGACT TTCGAGATAC TTCGAGAGGT TCGGGGGTGA GTATCTCGGA GACTTCGGGG AGTTAGAGGT GGATGGATTG AGGATCGCCA TGCTCCATGG CACAGAGGAG CCTCTTGTGA GGGCTGTGGT GACCTCCGGT CTATACGATG TCGTCGTTCG TGGGCACACG CATGTAGCAG AGGTCCGCCG CGAGGGAAGA ACCCTTGTGG TGAACCCCGG AGAGATATGG GGTCATCTTA CAGGTGTCAG GAGCGTTGCG ATAATGGATA CCTCAACGAC AGAGGTCGAG ATCGTCGAGC TCGGGAGGTG CGAGACTTTC AGGGAGATTC TGCAAAAATA G
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Protein sequence | MLIGIMSDSH DNFRGIKEAL GVFSKRDVKL VLHAGDVIGS GNAYLFDGYG IPVRLVYGNN DGDRVGLSRY FERFGGEYLG DFGELEVDGL RIAMLHGTEE PLVRAVVTSG LYDVVVRGHT HVAEVRREGR TLVVNPGEIW GHLTGVRSVA IMDTSTTEVE IVELGRCETF REILQK
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