Gene Mthe_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1588 
Symbol 
ID4461916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1721456 
End bp1721986 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID639700609 
Productphosphodiesterase 
Protein accessionYP_843998 
Protein GI116754880 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.398386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATAG GTATCATGTC CGACTCTCAC GATAACTTTC GGGGCATCAA GGAAGCTCTG 
GGCGTATTCT CTAAGAGAGA TGTTAAGCTG GTGCTGCACG CTGGAGACGT GATCGGATCC
GGGAACGCGT ATCTCTTCGA TGGCTACGGC ATTCCTGTGA GACTAGTCTA CGGGAACAAC
GACGGAGACC GCGTCGGACT TTCGAGATAC TTCGAGAGGT TCGGGGGTGA GTATCTCGGA
GACTTCGGGG AGTTAGAGGT GGATGGATTG AGGATCGCCA TGCTCCATGG CACAGAGGAG
CCTCTTGTGA GGGCTGTGGT GACCTCCGGT CTATACGATG TCGTCGTTCG TGGGCACACG
CATGTAGCAG AGGTCCGCCG CGAGGGAAGA ACCCTTGTGG TGAACCCCGG AGAGATATGG
GGTCATCTTA CAGGTGTCAG GAGCGTTGCG ATAATGGATA CCTCAACGAC AGAGGTCGAG
ATCGTCGAGC TCGGGAGGTG CGAGACTTTC AGGGAGATTC TGCAAAAATA G
 
Protein sequence
MLIGIMSDSH DNFRGIKEAL GVFSKRDVKL VLHAGDVIGS GNAYLFDGYG IPVRLVYGNN 
DGDRVGLSRY FERFGGEYLG DFGELEVDGL RIAMLHGTEE PLVRAVVTSG LYDVVVRGHT
HVAEVRREGR TLVVNPGEIW GHLTGVRSVA IMDTSTTEVE IVELGRCETF REILQK