| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1559 |
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| Symbol | |
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| ID | 4461851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1694669 |
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| End bp | 1695661 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639700580 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_843969 |
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| Protein GI | 116754851 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.461244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCCA AGGCAGGAGA GGGGCTCTTA GAGAACAGCG TTGTTTACAT CACCAAACAG
GGCGCCCAGG TTGGCGTGGA TGGTGGAAGG ATAGTTGTAT ACTCTAAAGA TGAGGGCGAG
ATTGCGTCCT TTCCGATGGG TCAGGTTGAC ACGATAAACA TATTCGGGAA CATCAACTTC
ACAACTCCAT TCGTCGCCAG AGCAAACGAG CACGGAATCG TGCTCAACTA TTTCACACAG
AATGGTCATT ATCGGGGGAG CTTTGTCCCA GAGAGAAACA CGATAGCAGA AGTGCGGCGG
AGGCAGTATG CTCTCTCGGA GGCCGACCGC CTGAGAATAG CGAGCGTGAT CATCCGGGCC
AAGATAAGAA ACTCTAGGAC AATGCTCTAC AGGAGAGGGG CATCGGATGA CAGGCTGGGG
GAACTGGAGG ACAGGGTTGC GGATGCTAAC GATCTTGATG AGCTCAGAGG GCTGGAGGGC
GAGGCTGCGG AGATATATTT TGGTATACTC AAACGTTGTG TTCCACAGGA CTGGAGCTTC
GAGCGGAGGA GCCGGAGGCC GCCGGCTGAC CATATGAATG CACTTCTCTC TCTGACGTAC
AGCATGATTA AGAACGAGGT GCTGAGCGCC TTGCGGCAGT ACAATCTGGA CCCCTTTCTG
GGTATCCTGC ATGCTGACCG ACACGGAAGG CCGGCGCTAG CGCTCGATCT CCTGGAGGAG
TTCAGGCCGA TCTTCTGCGA TGCCTTCACG CTGCGTCTCA TCAACAGGGG TGTCCTGAAG
CATGAGGATT TCCAGGTGAA CAATCATCTC AAGGAATACG CTTTCAAAAC ATATCTGGGG
AAGTTTGACG AATACATGCA GGAAGAGTTC AGGCACCCGA GATTCGATTA CACTGTTACA
AGAAGAAAGG CTGTGCGCAT GCAGGCGATC TTGCTCCGTA AAGCGATAAC CGGAGAGATG
AAGGAGTATC ATCCGCTGGA GTTCAAAAAA TGA
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| Protein sequence | MMPKAGEGLL ENSVVYITKQ GAQVGVDGGR IVVYSKDEGE IASFPMGQVD TINIFGNINF
TTPFVARANE HGIVLNYFTQ NGHYRGSFVP ERNTIAEVRR RQYALSEADR LRIASVIIRA
KIRNSRTMLY RRGASDDRLG ELEDRVADAN DLDELRGLEG EAAEIYFGIL KRCVPQDWSF
ERRSRRPPAD HMNALLSLTY SMIKNEVLSA LRQYNLDPFL GILHADRHGR PALALDLLEE
FRPIFCDAFT LRLINRGVLK HEDFQVNNHL KEYAFKTYLG KFDEYMQEEF RHPRFDYTVT
RRKAVRMQAI LLRKAITGEM KEYHPLEFKK
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