| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1538 |
|---|
| Symbol | |
|---|
| ID | 4462520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1668164 |
|---|
| End bp | 1669960 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639700561 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_843950 |
|---|
| Protein GI | 116754832 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.415289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAGC AGCCAGAGTA CCTGCCGATC TCCAGAAGAG AGATGAAGGA GCTTGGTGTA
GATCAGCTCG ACGTGATTTT GGTCACAGGC GATGCATATG TGGACCATCC ATCTTTCGGA
GCCGCGCTCA TCGGAAGGGT TCTGTGGGAT GCCGGATTCA CCGTGGGAAT CATCCCGCAG
CCCGACTGGA GGAGATCAGA GGACTTCAAG CGCCTCGGCG AGCCTCGGCT CTTTTTCGGA
GTAACAGCCG GAAACGTCGA CTCTATGGTC AACGCCTTCA CTCCAAATCT CAAGAGGAGG
AGCGGCGACG TGTACTCCCC GGGAGGAGAG ATCAGGAGGC CGGATCGAGC CACTCTGGTC
TATGCTGACA GGATCCACTC GATATTTCCA GGAAGGCCCG TAGTGCTTGG CGGCATCGAG
GCCAGCCTTC GTAGGTTTGC GCATTACGAT TACTGGTCTG ACTCTGTGAG GAGATCCATA
ATTGCAGATG CCCCCGCAGA TCTCCTCGTC TTCGGTATGG GAGAGCTGGC CGTGGTTGAA
ATAGCATCCA GGCTGGAGAG AGGAGAGTCA ATCGGCGAGA TCAGGGACGT AAGGGGCACG
GTCTTCAAGA TGAGCGTTAA GGAGTGGAAG AGCTCCAGCC ACGAGGAGTA CACTGTTATA
CCTTCATTCG ATGAGGTCTC CTCGGACAAG AGGAAGTACG CAGAGGCGTT CAGGCTCCAC
TACATGGAGC AGGACCCGTT CAGGGGCAGA GCTGTTGTGC AGCCCCACCC CAAGACGGTC
ATAGTCCAGA ATCCTCCTGC AAGACCGCTA AAAACAGAGG AGCTCGACAG GATATACGAG
CTCCCGTACA TCAGGAGAGA GCATCCGTCG TACAGAAAAC CTGTGCCAGC GCTGGAGAGT
GTCAGGTTCT CCATAACAAG CCACCGTGGC TGCTTTGGCT CCTGCAGCTT TTGCGCGCTG
ACACACCATC AGGGGCGCAT TGTGCAGTCC AGGAGCATAG AATCGATCCT CAAGGAGGCG
CGGAGGCTGG TTGAGATGCC CGGATTCAGG GGGGTGATAC AGGATGTGGG GGGACCGACA
GCCGACATGT ACGGCATGGT TTGTGCCCTG TGGGAGCGGG GAGGGTGCGG AAGAATATGC
ACGCCAGAGT GCGATAATAT CGAGATATCC CACAGAAGAT ACCTTGAACT GCTGCGAAGG
CTAAAGGAGA TACCTGGCGT CAGGCATGTC TTCGTCAGCT CTGGAATACG CCACGATCTT
GTAGTGAGAG ACGAAAAATA CGGGGAGCTC TTTCTGGAGG AGCTATGCCG CGAGCATGTA
TCAGGCCATC TCAAGATCGC ACCTGAGCAT ATCTCTGAAA GCGTGACGAG ATGCATGCAC
AAGCCACCTG TGGAGGTGCT GGACGCGTTC ATGAATTGCT TCCGTCGTGC AGCAGGAAAA
TCTGGAAGGG AGGAGTATGT GCTACCGTAT CTCATGTCGG GCCATCCAGG CTGTACTGTG
AGGGATATGA TAGAGCTGGC CGAGTACATG CGCGATCATC GCATAAGAGT TGAGCAGGTC
CAGGACTTCA CGCCCACGCC GATGACGGTC TCCACGACGA TGTATCATAC CGGACTCGAT
CCGTTCACGA TGAAGCCTGT CCATGTTCCC AGGGGCAGGG AGAAGATGAT CCAGAGAGCG
CTCCTCCAAT ACTGGCTTCC ACAGAACCGC AAGCTTGTCA GGGAGGGGTT GATTTCAGCA
GACAGAACAG ATCTGATCGG GGATGGACCG ATGTGTCTGG TGCCATCTAA CCCTTAG
|
|---|
| Protein sequence | MPEQPEYLPI SRREMKELGV DQLDVILVTG DAYVDHPSFG AALIGRVLWD AGFTVGIIPQ
PDWRRSEDFK RLGEPRLFFG VTAGNVDSMV NAFTPNLKRR SGDVYSPGGE IRRPDRATLV
YADRIHSIFP GRPVVLGGIE ASLRRFAHYD YWSDSVRRSI IADAPADLLV FGMGELAVVE
IASRLERGES IGEIRDVRGT VFKMSVKEWK SSSHEEYTVI PSFDEVSSDK RKYAEAFRLH
YMEQDPFRGR AVVQPHPKTV IVQNPPARPL KTEELDRIYE LPYIRREHPS YRKPVPALES
VRFSITSHRG CFGSCSFCAL THHQGRIVQS RSIESILKEA RRLVEMPGFR GVIQDVGGPT
ADMYGMVCAL WERGGCGRIC TPECDNIEIS HRRYLELLRR LKEIPGVRHV FVSSGIRHDL
VVRDEKYGEL FLEELCREHV SGHLKIAPEH ISESVTRCMH KPPVEVLDAF MNCFRRAAGK
SGREEYVLPY LMSGHPGCTV RDMIELAEYM RDHRIRVEQV QDFTPTPMTV STTMYHTGLD
PFTMKPVHVP RGREKMIQRA LLQYWLPQNR KLVREGLISA DRTDLIGDGP MCLVPSNP
|
|---|
| |