Gene Mthe_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1536 
Symbol 
ID4461723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1664923 
End bp1666854 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content54% 
IMG OID639700559 
Productarginine decarboxylase 
Protein accessionYP_843948 
Protein GI116754830 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1166] Arginine decarboxylase (spermidine biosynthesis) 
TIGRFAM ID[TIGR01273] arginine decarboxylase, biosynthetic 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.649083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAGG TTGACGACTC CATCGCCCTC TATGGAATTC ACGGCTGGGG TGACGGCTAC 
TTCTCAATCA ACGAGAAGGG CAACGTCGTC GTGATGCCGA ACAAGAGCAG CGACAGCTGT
GTCGATGTTA TGGATGTCAT CAGGAGACTG GAGACATCCG GAGAGAACCT GCCTGTGCTT
CTGAGATTTC CTCAGATAAT AGAGCACAGA ATCTGGGAGA TATACAGAGC ATTTACAGGA
TCCATATCAG AGTTCGGCTA CCAGGGAAAG TACCAGCCGG TATTTCCCAT GAAGGTGAAT
CAGAGGAAAG AGGTCATAGA GTACATCCTG AATTACGGCA GGGAGATCAA CATCGGCTTG
GAGATAGGCA CAAAGGCGGA GCTGCTCGCC GCGCTTACAC TGGATCTTCC TGAGGACTCG
CTGCTGATCT GCAATGGATA CAAGGATGAC GATTTCCTCC GTCTGGCCCT GATGTTCTCA
GACAAGCATA AGATAATAAT AGTCGTGGAC CTCTTCGAGG AGATCTTCGA TATACTGAGA
CTGGCCAGGA GCATGGAGGT GAGGCCACTT CTAGGTATGA GGGTCAAGCT CTTCTCAAAG
GGTAGTGGCA GATGGGCCGA GTCCGGCGGC GAGTCGGCCA AGTTCGGACT CTCGACCATC
GAGTGCCTGG AGCTGCTGAA GATCCTGGAG GAGAACGGCC TGCTCGATCG CCTCAGGATG
ATACACTTCC ACATCGGATC TCAGATCACA GACATACACA GAATAAAGCA CGCGATGAAC
GAGGCCGCTA GGATCTACGC GAAGGTGAGA AAGGTCGCTG AGATAGAGTA CTTCAACGTT
GGAGGCGGCC TGAGCGTTGA CTATGATGGC TCGAAGAGTT CCGGGCCCTC GAGCGCGAAC
TACACTCTGC GGGAGTACAG CAACGACATC GTTTACACGC TCCAGAAGAT ATGCGAGGAG
GAGGGCGTGC CGTGTCCTAC GATTGTCTCA GAGAGCGGCA GGGCGATAGC TGCATACCAC
TCATTCCTGG TCTTCAAGAT AATCGGCAAG AAGAACTCCA AGGATGGGTT CGTGGCGTTT
CCGCTTGAGG GGGATCCCAT ACAGATAGAG GATCTCTACT TTGCCTTCAA GAACATCAAC
CTCAAGAACT ACAAGGAGTA CTACCACGAT GCCCTCCATT ACAGGGATGA GCTGCTCGAC
TCGTTCAACC TAGGCAATAT CGGGCTTGAG GAGCGCGCGA AGGGGGAGAT GCTCTTCTGG
ATGGTCTGCC AGAAGGCCGT GAGCCTGGCA AGACATGCCG GCGACAACTC CGAGGAGTTC
AGGGAGCTGA AGAAGCTCGT GGGGCAGAAA TACATAGGGA ACTTCTCGCT CTTCCAGTCG
GTGCCGGACA TGTGGGGTGT GGGCCAGATA TTCCCAATAA TGCCCCTTCA CAGGCTCAGG
GAGGTGCCAT CAGAATGTGG GACAATAGCG GACATAACAT GTGATTCAGA TGGCGAGATA
AAGAGCTTTG CAGGAGGGAA GGAGGCCATA GAGCTCCACA AGCTCAGTAG GAGCGAGGAC
TACTACATGG GCATATTCCT GCTGGGGGCC TACCAGGACA CGCTCGGGGA CTTCCACAAC
CTCCTCGGCT GCGTTACAGA GGTTCATGTG CTTGTGGAGG GAAGGAGCTG GAGGATATCC
AGGCGCATAC CAGGAGATAC ATGCGAGAAG CTCCTGAAGT TCTTCAACTA CGACACAGAG
GCTTACCTCC AGAGGCTTGG CGAGAGATGT GCAACGGAAC CACAGCTCGA GGCGGTGCTT
GAGGAGGTCA GGAGAGCGCT CAGTACGACC ACGTACTTCA ACTCCCCATG CCTGGCCTCC
GAGACCGATG AGGATAAAGA GCTGCTGAAC AGCGCAGCTC ACAGGGTTAT GATCGAGACG
GGTCGCATCT GA
 
Protein sequence
MWKVDDSIAL YGIHGWGDGY FSINEKGNVV VMPNKSSDSC VDVMDVIRRL ETSGENLPVL 
LRFPQIIEHR IWEIYRAFTG SISEFGYQGK YQPVFPMKVN QRKEVIEYIL NYGREINIGL
EIGTKAELLA ALTLDLPEDS LLICNGYKDD DFLRLALMFS DKHKIIIVVD LFEEIFDILR
LARSMEVRPL LGMRVKLFSK GSGRWAESGG ESAKFGLSTI ECLELLKILE ENGLLDRLRM
IHFHIGSQIT DIHRIKHAMN EAARIYAKVR KVAEIEYFNV GGGLSVDYDG SKSSGPSSAN
YTLREYSNDI VYTLQKICEE EGVPCPTIVS ESGRAIAAYH SFLVFKIIGK KNSKDGFVAF
PLEGDPIQIE DLYFAFKNIN LKNYKEYYHD ALHYRDELLD SFNLGNIGLE ERAKGEMLFW
MVCQKAVSLA RHAGDNSEEF RELKKLVGQK YIGNFSLFQS VPDMWGVGQI FPIMPLHRLR
EVPSECGTIA DITCDSDGEI KSFAGGKEAI ELHKLSRSED YYMGIFLLGA YQDTLGDFHN
LLGCVTEVHV LVEGRSWRIS RRIPGDTCEK LLKFFNYDTE AYLQRLGERC ATEPQLEAVL
EEVRRALSTT TYFNSPCLAS ETDEDKELLN SAAHRVMIET GRI