Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1536 |
Symbol | |
ID | 4461723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1664923 |
End bp | 1666854 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639700559 |
Product | arginine decarboxylase |
Protein accession | YP_843948 |
Protein GI | 116754830 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.649083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAGG TTGACGACTC CATCGCCCTC TATGGAATTC ACGGCTGGGG TGACGGCTAC TTCTCAATCA ACGAGAAGGG CAACGTCGTC GTGATGCCGA ACAAGAGCAG CGACAGCTGT GTCGATGTTA TGGATGTCAT CAGGAGACTG GAGACATCCG GAGAGAACCT GCCTGTGCTT CTGAGATTTC CTCAGATAAT AGAGCACAGA ATCTGGGAGA TATACAGAGC ATTTACAGGA TCCATATCAG AGTTCGGCTA CCAGGGAAAG TACCAGCCGG TATTTCCCAT GAAGGTGAAT CAGAGGAAAG AGGTCATAGA GTACATCCTG AATTACGGCA GGGAGATCAA CATCGGCTTG GAGATAGGCA CAAAGGCGGA GCTGCTCGCC GCGCTTACAC TGGATCTTCC TGAGGACTCG CTGCTGATCT GCAATGGATA CAAGGATGAC GATTTCCTCC GTCTGGCCCT GATGTTCTCA GACAAGCATA AGATAATAAT AGTCGTGGAC CTCTTCGAGG AGATCTTCGA TATACTGAGA CTGGCCAGGA GCATGGAGGT GAGGCCACTT CTAGGTATGA GGGTCAAGCT CTTCTCAAAG GGTAGTGGCA GATGGGCCGA GTCCGGCGGC GAGTCGGCCA AGTTCGGACT CTCGACCATC GAGTGCCTGG AGCTGCTGAA GATCCTGGAG GAGAACGGCC TGCTCGATCG CCTCAGGATG ATACACTTCC ACATCGGATC TCAGATCACA GACATACACA GAATAAAGCA CGCGATGAAC GAGGCCGCTA GGATCTACGC GAAGGTGAGA AAGGTCGCTG AGATAGAGTA CTTCAACGTT GGAGGCGGCC TGAGCGTTGA CTATGATGGC TCGAAGAGTT CCGGGCCCTC GAGCGCGAAC TACACTCTGC GGGAGTACAG CAACGACATC GTTTACACGC TCCAGAAGAT ATGCGAGGAG GAGGGCGTGC CGTGTCCTAC GATTGTCTCA GAGAGCGGCA GGGCGATAGC TGCATACCAC TCATTCCTGG TCTTCAAGAT AATCGGCAAG AAGAACTCCA AGGATGGGTT CGTGGCGTTT CCGCTTGAGG GGGATCCCAT ACAGATAGAG GATCTCTACT TTGCCTTCAA GAACATCAAC CTCAAGAACT ACAAGGAGTA CTACCACGAT GCCCTCCATT ACAGGGATGA GCTGCTCGAC TCGTTCAACC TAGGCAATAT CGGGCTTGAG GAGCGCGCGA AGGGGGAGAT GCTCTTCTGG ATGGTCTGCC AGAAGGCCGT GAGCCTGGCA AGACATGCCG GCGACAACTC CGAGGAGTTC AGGGAGCTGA AGAAGCTCGT GGGGCAGAAA TACATAGGGA ACTTCTCGCT CTTCCAGTCG GTGCCGGACA TGTGGGGTGT GGGCCAGATA TTCCCAATAA TGCCCCTTCA CAGGCTCAGG GAGGTGCCAT CAGAATGTGG GACAATAGCG GACATAACAT GTGATTCAGA TGGCGAGATA AAGAGCTTTG CAGGAGGGAA GGAGGCCATA GAGCTCCACA AGCTCAGTAG GAGCGAGGAC TACTACATGG GCATATTCCT GCTGGGGGCC TACCAGGACA CGCTCGGGGA CTTCCACAAC CTCCTCGGCT GCGTTACAGA GGTTCATGTG CTTGTGGAGG GAAGGAGCTG GAGGATATCC AGGCGCATAC CAGGAGATAC ATGCGAGAAG CTCCTGAAGT TCTTCAACTA CGACACAGAG GCTTACCTCC AGAGGCTTGG CGAGAGATGT GCAACGGAAC CACAGCTCGA GGCGGTGCTT GAGGAGGTCA GGAGAGCGCT CAGTACGACC ACGTACTTCA ACTCCCCATG CCTGGCCTCC GAGACCGATG AGGATAAAGA GCTGCTGAAC AGCGCAGCTC ACAGGGTTAT GATCGAGACG GGTCGCATCT GA
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Protein sequence | MWKVDDSIAL YGIHGWGDGY FSINEKGNVV VMPNKSSDSC VDVMDVIRRL ETSGENLPVL LRFPQIIEHR IWEIYRAFTG SISEFGYQGK YQPVFPMKVN QRKEVIEYIL NYGREINIGL EIGTKAELLA ALTLDLPEDS LLICNGYKDD DFLRLALMFS DKHKIIIVVD LFEEIFDILR LARSMEVRPL LGMRVKLFSK GSGRWAESGG ESAKFGLSTI ECLELLKILE ENGLLDRLRM IHFHIGSQIT DIHRIKHAMN EAARIYAKVR KVAEIEYFNV GGGLSVDYDG SKSSGPSSAN YTLREYSNDI VYTLQKICEE EGVPCPTIVS ESGRAIAAYH SFLVFKIIGK KNSKDGFVAF PLEGDPIQIE DLYFAFKNIN LKNYKEYYHD ALHYRDELLD SFNLGNIGLE ERAKGEMLFW MVCQKAVSLA RHAGDNSEEF RELKKLVGQK YIGNFSLFQS VPDMWGVGQI FPIMPLHRLR EVPSECGTIA DITCDSDGEI KSFAGGKEAI ELHKLSRSED YYMGIFLLGA YQDTLGDFHN LLGCVTEVHV LVEGRSWRIS RRIPGDTCEK LLKFFNYDTE AYLQRLGERC ATEPQLEAVL EEVRRALSTT TYFNSPCLAS ETDEDKELLN SAAHRVMIET GRI
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