| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1484 |
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| Symbol | |
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| ID | 4461938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1599405 |
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| End bp | 1602590 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639700503 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_843897 |
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| Protein GI | 116754779 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0728646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTCA ATAGGCTGGT GTTGCGGAAC TTCAAGAAGT ACAGGCGTGC AGATATAACA
TTCCAGGACG GGCTCACTGG CATAATAGGC GGGAATGGAG CAGGCAAGAG CACGATCGTC
GAGGCGATAG CCTGGGCGCT GTATGGCAGC AGGGCATACA CTGTCGAGAA GCTCGAGAAG
AGGCTCATAA AGAACGTGAA CGCCAGGCCC GAGGAGTCGG TGGAGGTTCA TCTGACGCTC
TCCATTGGAA AGAATGAGAT CGTCATATCG AGAATCATGA AGGGGAAGAG CATGCTGCCC
GATGCATCTC TGTGCATCAA CGGCCAAGAG GTCGCAAAGG GCATGCGCGA GGTCGATGCT
CATCTCTCTA AACTGATGAA GATAAGCTTC CAGGACTTCA TGAGGACATT CTATGCGCGA
CAGAAGGACC TTGATAATCT CATAAGAGAG GGTGGAGCTG GAAAGAGGGA TTACCTGCTG
AAGCTCCTCG GCCTTGAGGA CATCCGTGAG ATCGGGCTCG AGATCACGAA GGATGATCTG
AGAGAGATCG AGAGAAGGAT CAATCTGGCC TCCGGAGCGC TCTCGGAGCT GGGCGATGTG
GAGAGGAGGA TCGAGGAGAT AAGAGCGCAG GAGGCATCTG CCAGGGCAGA GCTGATCAAA
CGGGAGATTG CTCTCAAAGA CGCTGAAAAT GAGCGGAAGA GGGCTAGGGA GGATCTGGAG
CGGCTGGACG AGAAGAGACA GGAGCATATG CGTCTGAAGC GGGAGATCGA GCACGTTCAG
GGCTACATCG CAGATAGGGA GAGGACTGCA AGAGAGGAGC GCGCAAGGCT CGAGGGGATT
GAGGAGAAGA AGAGAAAGCT CCATGCTCTC ACATCAGATC TGAAGCGCCT GAATGAGATA
AGAAAGCACC TCCATGACCT GGAGGCGGCT CGGAGAGATT ACGAGCAACT GAACTCAATT
CTTAAGAGCC TTCAAATAGA GAGAAGGGAG GCGCTTCGCT CACTGAATGA GCTTGAGACA
AGGCTTGATG AGCTCTACAG ATGCCGCAGT GAGATGGAGG GGCTCAGGGA GAAGGCGGAT
CTCTATGTGA CTACACAGAG GGAGCTGGAG GAGCTCGAGA TAAAGAGAGA GCGGTTCACC
TCCCACGTCT CATCTATCGC TAGCCTGGAT GCAGAGAGGT CCGCGCTTTT GAGAGATTAC
AAGATGAAGG CTGACCTTGT GAGAGAGCTT CGGGAGGCCA GGAGATCGCT TCCAGATCTC
GAGCGCCGGC TGTCTGTCCT GGAATCGCTG AAGAGGGAGC TGGAGGAGCT TGAAAGGGCA
AAAGAGATGC ATCGCAGGCT TGATGAGCTG TTATCTGAGA GAGACTCACG CATCGAGAGG
AGAGCTCAGC TTCTGAATCG GCTTGATATT ATTCACAAAA AGCTCTCTGA GATCGGCGAT
CTTGCCCGGG AGGAGAGGGG TCTCAGAGAG AGGGAGGTCC AGCTGGAGAC GCTCATAGAG
ACTCTGAATC AAAAGAGGAC AGAGATCGAG AGCCGGCGCA ATCTCGCAAG ATCCAAGATG
CACGAGTCTC AGAGCAACCT CAAACGAATC GAGAGCCTCG GGGCCGAGAG CCCCTGCCCG
ACGTGCGAGC GCCCACTTGG CGACCAGTAC TCTCGACTTA CGGAGAAGTA CAGGGAAGAG
ATCAGAAGGT ACAGAGACGA TTACGAGACT GCTACAAATG AGCTCCGCGA TTTGAATGAG
CGCGTCAAAA ATGCGCAGCA TCTCAGGGAG CGTCTCAGGG CATCCGCAGA ATCGCTGGGC
AAGAGGAGGA GCGATCTCGC ATCGCTTGAG GCTGAGCAGA GGGAGGTCAT GCTCCAGCTC
TCAGAGATGA GGGAAAGAAT CTCCGAGCTG GATGGGGAGA TCGATGCCAT AGGCCAGGCT
GAGTATGATT CGAAGAGACA CGAAGAGGTC AAGCGCTCGC TTTCAGGTTA CAATGAGCTC
ATCGATAAGC GGGCGAGGCT CCTGGCACGC CTCGAAAACC TCCCCGGGCT GGAGAGCGAG
CTGGAGAATA CCAGAGAAAA AGCATCCGCG CTGGATGAGA GAATATTCGA GCACTCGAGA
AGCATCTCCA TCTTAGATTA CGATGAGCGT GCATACCTGA GGGCGAGATC GACTCTCTCA
GAGCTCCAGA GCTCCCACGA GAGGTACGGG CTCCTCCTCC AGCAGACAGG CGAGATTGAA
AGGCTTGAGA AGCTGCTGGA AGCCCTGAGA ATACGGGTCC AGAGGCTGGA CGGAGATATG
CTGAAGGTGG AGGGGGAGCT GTCAGAGCTG GCATTCGATC CGAATGAGTA TGATATGCTC
AGAGCAGAAG AAACAAGGCT TGCTGAGATC GAATCGATCG CGAACCGCCT CAGGGTCGAG
ATCGCAGCTG AGGATCTCTC GAGATCAAGA CTGTTCGAGG CCGAAACGGA TCTCAGAAGG
CTGCACACGC AGATGGCTGA GCTCAGTACG CGTCTTGAGG AGCTGGGTTA TACCGATGCA
TCTTATGAGA ATGCGAAGAG AATACTATCA GATGCGGATG AGAGGCTGAG GTGTGCGAAC
GAGGAATACG CCAAAATGCG CGATGAGCTC AGGAGGCTGG AGTGGTCCCT ATCTGGCCTG
AATGATGATC TGAAGAGAAA AAGGGAGCTG GAGAGGAAGA TCGATGAGCT AAACAGAAAA
GCACAGGTGG TATCCGTAGT CAGGGACCTG CTGGTGCGGT TCATGGACGC GCTCCTGGTG
AGGGTGAGAA ATGAGATCGC CCAGAACGCG GCAAGGATAA TGGAGGAGGT CACCGGCAAG
TACAGCATAC TCAAGATAGA TGAGAACTTC AACATACTGG TCGATGACAG GGGCACGGAT
TATCCGATAT GGAGGTTTTC AGGCGGAGAG ATAGATATGA TCGCCCTCTC TGTGAGAATA
GCGATAAGCG AGTATCTCAT GAGGTCTTTC GGGGAAGAGA GCGGCTACTC CTTCATGATA
CTCGATGAGG TCTTCGGATC GCAGGATATC GAGCACAGGG AGAGGATGAT AAACATGCTC
AGGAGTCTAG GCGTGAGATT CCCACAGCTG TTTGCGATAA GCCACATCAG CGATGTCCAG
GGTCAGTTCG ACAACACGAT AGTGGTGAGC GAGGATGATA TGGGAAACAG CGTTGCATAT
CAGTGA
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| Protein sequence | MHLNRLVLRN FKKYRRADIT FQDGLTGIIG GNGAGKSTIV EAIAWALYGS RAYTVEKLEK
RLIKNVNARP EESVEVHLTL SIGKNEIVIS RIMKGKSMLP DASLCINGQE VAKGMREVDA
HLSKLMKISF QDFMRTFYAR QKDLDNLIRE GGAGKRDYLL KLLGLEDIRE IGLEITKDDL
REIERRINLA SGALSELGDV ERRIEEIRAQ EASARAELIK REIALKDAEN ERKRAREDLE
RLDEKRQEHM RLKREIEHVQ GYIADRERTA REERARLEGI EEKKRKLHAL TSDLKRLNEI
RKHLHDLEAA RRDYEQLNSI LKSLQIERRE ALRSLNELET RLDELYRCRS EMEGLREKAD
LYVTTQRELE ELEIKRERFT SHVSSIASLD AERSALLRDY KMKADLVREL REARRSLPDL
ERRLSVLESL KRELEELERA KEMHRRLDEL LSERDSRIER RAQLLNRLDI IHKKLSEIGD
LAREERGLRE REVQLETLIE TLNQKRTEIE SRRNLARSKM HESQSNLKRI ESLGAESPCP
TCERPLGDQY SRLTEKYREE IRRYRDDYET ATNELRDLNE RVKNAQHLRE RLRASAESLG
KRRSDLASLE AEQREVMLQL SEMRERISEL DGEIDAIGQA EYDSKRHEEV KRSLSGYNEL
IDKRARLLAR LENLPGLESE LENTREKASA LDERIFEHSR SISILDYDER AYLRARSTLS
ELQSSHERYG LLLQQTGEIE RLEKLLEALR IRVQRLDGDM LKVEGELSEL AFDPNEYDML
RAEETRLAEI ESIANRLRVE IAAEDLSRSR LFEAETDLRR LHTQMAELST RLEELGYTDA
SYENAKRILS DADERLRCAN EEYAKMRDEL RRLEWSLSGL NDDLKRKREL ERKIDELNRK
AQVVSVVRDL LVRFMDALLV RVRNEIAQNA ARIMEEVTGK YSILKIDENF NILVDDRGTD
YPIWRFSGGE IDMIALSVRI AISEYLMRSF GEESGYSFMI LDEVFGSQDI EHRERMINML
RSLGVRFPQL FAISHISDVQ GQFDNTIVVS EDDMGNSVAY Q
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