Gene Mthe_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1460 
Symbol 
ID4462403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1562013 
End bp1563104 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content54% 
IMG OID639700479 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_843874 
Protein GI116754756 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.594691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACA TCCCGATTGC CAGGCCGCTC CTGGGCGATG AGGAGATAGA GGTCGTATCC 
CAGGTGATCA GGTCAGGCAT GCTTGTTCAG GGGGAGATGG TCAGGCGATT TGAGGAGGAG
TTCTCCTCGT ACGTTGGAGT GAAAGACTCG ATTGCTGTGA GCAGTGGCAC CGTTGCGCTG
GATCTCGCGC TCAAGGCCTT CGGTCTCGAT CCTGGAGACG AGGTGATATG CCCAGCCTTC
ACGTTCATCG CGACATCAAA CGCGGTTCTG TACCAGGGGC TCCGGCCTGT ATTTGCAGAT
GTTGATCCCC GGACATTCAA CCTCAACCCA GAGGATGTTC TTGAAAAAGT GAACAGCAAC
ACAAAAGCAA TCCTGGGAGT GCACCTCTAC GGCCAGCCGT TCGATGTTAA AGCCATTCAC
GAGATCTGCG AGGATCATGA CCTCATCCTT ATAGAGGACT GTGCCCAGGC GCATGGCGCC
GAGTACGAGG GGAAGAGGGC GGGGAGCTTC GGCACAGGAT GCTTCTCATT CTACCCGACG
AAGAACATGA CTACTGGCGA GGGAGGGATG ATAACAACAG ATGATGATAT GCTTGCAGAA
AGACTCAGAC TTCTTAGGAA CCATGGTGAC CGGGGGAAGT ACAATCACGT GATGCTCGGA
TACAACTACA GAATGACAAA CATCCAGGGC GCGATAGGCC TCGTGCAGCT CAGAAAGCTG
GATGCGTTCA TTGATGCAAG AATAAAAAAT GCGGAGTATC TGAGCGCGCA CATAAGCAGA
GATGGCATAA CAACGCCCTG GAGGGATCCG AGGTGCAAGC ATGTCTACAA CCAGTACGTC
CTCAGGGTCG AGGACGACTT CCCGATGAGC CGCGATGATC TTGCCAGCTA TCTCCAGTCA
AAGGGTATAG GGACGGGTAT ACATTACCCG ATGCCTGTTT ATGAGCAGCC CCTGTACCGG
CAGCTCGGAA TCAGATCGAT CTGTCCCGTT GCCGAGGAGA TCTCCAGAAG AGTGATAAGC
GTTCCAGTGC ATCCAGGGCT CAGCGATGAG GATCTGAAGA GAATCGCGGA CGCGGTGAAC
AGCGCTGGGT GA
 
Protein sequence
MDDIPIARPL LGDEEIEVVS QVIRSGMLVQ GEMVRRFEEE FSSYVGVKDS IAVSSGTVAL 
DLALKAFGLD PGDEVICPAF TFIATSNAVL YQGLRPVFAD VDPRTFNLNP EDVLEKVNSN
TKAILGVHLY GQPFDVKAIH EICEDHDLIL IEDCAQAHGA EYEGKRAGSF GTGCFSFYPT
KNMTTGEGGM ITTDDDMLAE RLRLLRNHGD RGKYNHVMLG YNYRMTNIQG AIGLVQLRKL
DAFIDARIKN AEYLSAHISR DGITTPWRDP RCKHVYNQYV LRVEDDFPMS RDDLASYLQS
KGIGTGIHYP MPVYEQPLYR QLGIRSICPV AEEISRRVIS VPVHPGLSDE DLKRIADAVN
SAG