| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1451 |
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| Symbol | |
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| ID | 4462394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1551324 |
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| End bp | 1552058 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639700470 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_843865 |
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| Protein GI | 116754747 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.346129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGAGA AGTCGGGCAG GAATGAAGTG GAGGATGTTG AGAGCACCTT TGCAGTTTCA
GCGCCGGATA TGCCCTGCGA CCAGAGTTTT TTTGAGACCG ATTTGATGAA TGCGGATCTT
TGGGTCGCAC GTGGCAGATA CCTCATGAAG GCTCTTGGGA GATACTCAGA TGCGCTGGAT
GCGTTTGAGA GGGCGATCGA GCTCGATCCA TCACATGCCA GAGCCTGGAG GGGAAAGGCT
GCAGCTCTGA ACAACCTCGA TCGCTACTCT GAGGCGCTAG AGGCTTGCAA GCGCGCGCTA
GAGCTCGATC CGTTCAATTC CAGAAGTTGG ATCGTCAAGG GTTTTGCTCA CCATAGCCTG
GGGGAGTACG AGGAGGCGGT AAAGAGCTAT GACAGGGCAA TCGAGCTCGA TCCGATGGGG
CAGGATGCGA GAAGGGCCTG GAACAACCGT GGTGCTGCTC TCGATAACCT CGGGCGGCAT
GAGGACGCTC TCAGATCGTA TGATGAGGCG ATCATGCTCG AGCCATTTGA TGCATATGCC
TGGAACAACA AGGGGGTCTC GCTTGTTGCT CTCAAGAGAT ATGACGATGC GCTGCTCTGC
TTCGAGAAGG CCATAAAGAT CTACCCCGGC TACTGGACCG CCTGGATGAA CAGGGGTGGG
TGCCTGAAGT CCCTGGGCAG ACACGAGGAG GCGGAGGAGT CACTTGAGAT GGCAAGGAGG
ATAGAATTGT CATGA
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| Protein sequence | MSEKSGRNEV EDVESTFAVS APDMPCDQSF FETDLMNADL WVARGRYLMK ALGRYSDALD
AFERAIELDP SHARAWRGKA AALNNLDRYS EALEACKRAL ELDPFNSRSW IVKGFAHHSL
GEYEEAVKSY DRAIELDPMG QDARRAWNNR GAALDNLGRH EDALRSYDEA IMLEPFDAYA
WNNKGVSLVA LKRYDDALLC FEKAIKIYPG YWTAWMNRGG CLKSLGRHEE AEESLEMARR
IELS
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