| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1361 |
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| Symbol | |
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| ID | 4462079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1458327 |
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| End bp | 1459100 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639700378 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_843776 |
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| Protein GI | 116754658 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.918762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTG TGATATCTGA GATAAGAAAG GACTACCTGT ACAACCTGCT GCTGCGCGGC
GAGCGTGCAG ATGGGAGATC CTTTACTCAA TACAGGCCGA TAGAGATCGA GAGGAACATA
ATAAAAAAAG CTGAAGGCAG CGCTCTTGTC AAGCTCGGAA AAACCCAGGT CATGGTCGGG
ATCAAGATAC AGCCGGGCGA GCCGTTCCCG GACGCTCCAA ACCGTGGTGT TATAGTAACG
AATGCAGAGC TTGTGCCGCT GGCATCTCCG ATATTCGAGC CGGGACCGCC GAACGAGTAC
GGAATAGAGC TCGCGCGGGT TGTCGACAGG GGAGTTCGCG AGTCTGGTTC TGTTGATCTC
GATGCACTCT GCATCGTTCC CGGGGAGAAG GTCTGGATAA TATTCATAGA CATACACATA
CTGGATGACT GTGGGAATAT CATGGATGCA TCCAGCCTCG GCGCCATCGC AGCGCTTCTC
GGAGCCACTG TGCCGGCGAG CCGGTTCGGT CTCGGCGAGG ACTTCCAGCT TCCGGTCAGG
GATATACCCA TAGCCACGAC AGCCGTCGAA TTCGGGGATG TTGTTCTCTT CGATCCGGAT
GTGGATGAGG AGGCAATAGC CGATGCCAAG CTCACAGTGA TAACAAAGGC AGACGGTACG
ATATGCGGGA TGCAGAAGAG CGGGCCGGGG ATGCTCTCTG AGGATCAGGT GTACCGCATT
GTTGATATAG CATGTGATAA TGCTAGGGAG ATCCGAGAGA AGTTTCTGGA ATGA
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| Protein sequence | MSSVISEIRK DYLYNLLLRG ERADGRSFTQ YRPIEIERNI IKKAEGSALV KLGKTQVMVG
IKIQPGEPFP DAPNRGVIVT NAELVPLASP IFEPGPPNEY GIELARVVDR GVRESGSVDL
DALCIVPGEK VWIIFIDIHI LDDCGNIMDA SSLGAIAALL GATVPASRFG LGEDFQLPVR
DIPIATTAVE FGDVVLFDPD VDEEAIADAK LTVITKADGT ICGMQKSGPG MLSEDQVYRI
VDIACDNARE IREKFLE
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