| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1319 |
|---|
| Symbol | |
|---|
| ID | 4462186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1426809 |
|---|
| End bp | 1428038 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700338 |
|---|
| Product | translation initiation factor IF-2 subunit gamma |
|---|
| Protein accession | YP_843737 |
|---|
| Protein GI | 116754619 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) |
|---|
| TIGRFAM ID | [TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.472649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCAAAAC CGGAAGTTAA CATAGGCATG GTCGGCCATG TGGACCATGG GAAGACCACA
CTGGTCAGGG CACTGTCCGG CATATGGACC GATCAGCACA GCGAGGAGAT GAAGAGAGGT
ATATCGATCA GGCTTGGCTA TGCCGATGCT ACCTTCAGGA AGTGCCCTAA CTGCCCAGCA
CCCGACTGCT ACACCGTGGA CGAGATCTGC AAGCACTGTG GATCCCCCAC CAACATTCTC
AGAACAGTCT CCTTCGTGGA CTCCCCGGGG CATGAGACTC TCATGGCCAC AATGCTCTGC
GGGGCCGCAA TAATGGACGG CGCAGTTCTG GTGATAGCTG CCAACGAGCC GTGCCCTCAG
CCCCAGACGA AGGAGCATCT GATGGCCCTG AACATAACAG GGATAGACAA GATCGTCATC
GTGCAGAACA AGATAGATCT CATCTCTAAG GAGGAGGTGC TGGAGCACTA CAGGCAGATA
AAGGCCTTTG TCAAGGGCAC GGTTGCTGAG AATGCTCCTG TGGTGCCTAT ATCGGCTCAG
CAGAACATAA ACATAGACAT GGTGATCCAA GCGATAGAGG AGGTTATTCC CACGCCGTCG
AGGGATGCCA AGAAACCGCC GTTGCTGAAG ATAGCGAGAT CGTTCGATGT CAATCGCCCC
GGAGCTCCGG TTGAGAAACT GATAGGGGGC GTTGTCGGTG GCACCCTGAG CCAGGGCGTG
CTTCGAAAGG GCGACAAGCT CGAGATAGTC CCCGGCAGGC TCGTTGAGGC GGAGGGCAAG
AAGCAGTGGG TCCCGATAGA GACCAAGGTG ACGAACCTGA AAGCGGGTGG GGAGGATGTT
GCAGAGGTCA CCCCAGGAGG GCTGATCGGC GTCGGTACGA ATCTGGACCC CGCGATAACG
AAGAGCGATA ATCTGGTTGG ACAGGTTGCG GGCGCTCCTG GAAAGCTTCC TCCTGTGTGG
CACAGCTTCG TTATGGACAT GAAGCTCCTG GATAGGGTGG TTGGGTCCAC GGAGGAGGCT
GCTGTTGAGC CGATACATAC AAGCGAGCCG TTAATGCTCA ACATAGGAAC AGCAACGACT
GTGGGCGTGG TGACGAGCGC TAGGGAGAGC GGCAAGGTTC AGGTACAGCT CAAGAGACCG
GTGTGCGCAG AGGTGGGAGA CCGAGTCGCG GTCAGCAGGC GCATCGGTGC CAGATGGCGT
CTGATCGGTG TCGGAACCAT AGTCTCCTAG
|
|---|
| Protein sequence | MPKPEVNIGM VGHVDHGKTT LVRALSGIWT DQHSEEMKRG ISIRLGYADA TFRKCPNCPA
PDCYTVDEIC KHCGSPTNIL RTVSFVDSPG HETLMATMLC GAAIMDGAVL VIAANEPCPQ
PQTKEHLMAL NITGIDKIVI VQNKIDLISK EEVLEHYRQI KAFVKGTVAE NAPVVPISAQ
QNINIDMVIQ AIEEVIPTPS RDAKKPPLLK IARSFDVNRP GAPVEKLIGG VVGGTLSQGV
LRKGDKLEIV PGRLVEAEGK KQWVPIETKV TNLKAGGEDV AEVTPGGLIG VGTNLDPAIT
KSDNLVGQVA GAPGKLPPVW HSFVMDMKLL DRVVGSTEEA AVEPIHTSEP LMLNIGTATT
VGVVTSARES GKVQVQLKRP VCAEVGDRVA VSRRIGARWR LIGVGTIVS
|
|---|
| |