| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1298 |
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| Symbol | |
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| ID | 4462939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1403673 |
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| End bp | 1405175 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639700316 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_843716 |
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| Protein GI | 116754598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGAAGA TATTCGATAC GACCCTTAGG GACGGAGAGC AGACGCCTGG AGTATCGCTC
ACCCCTGAGG AGAAGCTCAT AATCGCCAGG CAGCTCGACA AGCTCGGGGT CAATGTCATC
GAGGCTGGCT TTCCGGTATC GTCCAAGGGC GAGTTTGAAT CTGTCCGGGC CATAGCGAAT
GAGGGGCTTA CAGCCACGGT CTGCGGCCTC TCCAGGATAA TCAAAAACGA TATCGACAGG
TGTCTCGATG CCGATGTCGG CATGGTCCAT GTATTCGTAT CGACCTCCGA CATACAGATA
GCGCATACGA TAAAGAAGAG CAGGGAGGAG ATAGTTGCGG ACTCGATAAA GGCGGTCGAG
TACGTGAAAG ACCATGGTGT TTTGTGCCTC TTCTCGGCCA TGGACGCCAC AAGGACGCCT
CCTGCTTTCC TCAGGGAGAT CTTCACGGCT GTTGAGGGCG CTGGGGCTGA CATAATAAAC
ATACCAGACA CTGTGGGTGT AATGGCGCCG TCCGCGTTCC ACCGGCTCGT GAAAGAGGTC
TGCAGCTACA TGAACATACT CGTGGATGTG CACTGTCACA ACGACTTCGG GCTTGCGGTG
GCGAACAGCT TGGCTGCTGT GGAGGCCGGT GCCAGGGAGG TCCAGGTCAC AGTCAACGGC
CTGGGAGAGA GGGCCGGCAA TGCGAACCTC GCAGAGACCG TCATGAGCCT CCATTCGATA
TACGGAGCGA AAACCTCGAT AAGAACACAG TACCTCGTTG AGACTGCGAG GCTTGTGGAG
CGCCTCACAG AGACCCGGAT ACCCATTAAC GCGCCGATCG TCGGGGATAA CGCGTTCTCC
CACGAGAGCG GCATACACAG CCATGGTGTT ATAGAGAGAA GCGACACATT CGAGCCTGGG
ATAATGACTC CTGAGATGGT CGGCCACAGG CGCAGGATAG TCCTCGGAAA GCACACCGGA
AGGCATGCGG TGAAGAAGGT GCTCGAGGAG GCTGGATATC ATCCGACAGA GGACCAGCTC
CAGGAGATAC TTCGGAGGAT AAAGGAGCTC GGCGACAAGG GCAAGCAGGT CACGGATGCA
GATCTCCAGA CCATTGCAGA GGTCGTCCTG GGCGAGATCG CAAAGGGAGA GCAGGCGCTC
GTCCTCAAAG AGGTGGCTGT GATGACAGGG AACACTATCA CACCCACAGC CACTGTCAGG
GCTCTATTCA GGGGAGAGGA GAAGGTTCTC GCAAACATTG GCGTGGGACC TGTGGATGCT
GCAGTGAAGG CTGTGAGGGA GATACTCGGC CAGGACAGCC TGATCAGGGT GAGGGACTTC
AGGATTGAGG CAATCACAGG AGGCTCTGAT GCCCTTGCGG AGGTCGTGAT AGGGGTTGAG
GATACTGAGG GAAGAAAGGT CTCAGCTCGA TCCGCGCGGG AGGACATAGT CATGGCATCG
GTGGAGGCGC TTGTCAGCGC GATAAACCGT CTTCTGCTTC TTGAGGAACG TACATCCAAG
TGA
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| Protein sequence | MVKIFDTTLR DGEQTPGVSL TPEEKLIIAR QLDKLGVNVI EAGFPVSSKG EFESVRAIAN
EGLTATVCGL SRIIKNDIDR CLDADVGMVH VFVSTSDIQI AHTIKKSREE IVADSIKAVE
YVKDHGVLCL FSAMDATRTP PAFLREIFTA VEGAGADIIN IPDTVGVMAP SAFHRLVKEV
CSYMNILVDV HCHNDFGLAV ANSLAAVEAG AREVQVTVNG LGERAGNANL AETVMSLHSI
YGAKTSIRTQ YLVETARLVE RLTETRIPIN APIVGDNAFS HESGIHSHGV IERSDTFEPG
IMTPEMVGHR RRIVLGKHTG RHAVKKVLEE AGYHPTEDQL QEILRRIKEL GDKGKQVTDA
DLQTIAEVVL GEIAKGEQAL VLKEVAVMTG NTITPTATVR ALFRGEEKVL ANIGVGPVDA
AVKAVREILG QDSLIRVRDF RIEAITGGSD ALAEVVIGVE DTEGRKVSAR SAREDIVMAS
VEALVSAINR LLLLEERTSK
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