| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1293 |
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| Symbol | |
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| ID | 4462934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1399750 |
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| End bp | 1400133 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700311 |
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| Product | 30S ribosomal protein S8e |
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| Protein accession | YP_843711 |
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| Protein GI | 116754593 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2007] Ribosomal protein S8E |
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| TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000273371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTGGC AGGGAAAGTC GGCTAGAAAG CCCACTGGTG GAAGGTTGGT TCCGGCCAGA
GGGAAGAGAA AGTATGAGCT GGGCAGAGAG CCAGCAGAGA CGCTTGTCGG TCCAATCAGG
GTCAAGAAGA TCCGCACACG TGGAGGCAAC CAGAAGCTCC GCCTTCTTAA AGCAGACGTT
GCCAGCGTCT CGGATCCGGT CACAGGTGCC ACAAAGCTTG TGAAGATCGA GACAGTGGTG
GACAATCCTG CAAACAGGCA TTATGTGAGA AGGAACATAA TCACGAGAGG TGCTGTGATC
AGGACCGAGA TCGGCGAGGC CAGGGTTTTG AGCAGACCCG GGCAGGATGG CGTGGTGAAT
GCTGTTCTCC TGCCGAAGCA CTGA
|
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| Protein sequence | MKWQGKSARK PTGGRLVPAR GKRKYELGRE PAETLVGPIR VKKIRTRGGN QKLRLLKADV
ASVSDPVTGA TKLVKIETVV DNPANRHYVR RNIITRGAVI RTEIGEARVL SRPGQDGVVN
AVLLPKH
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