Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1277 |
Symbol | |
ID | 4461945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1384212 |
End bp | 1385564 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639700294 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_843695 |
Protein GI | 116754577 |
COG category | [R] General function prediction only |
COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000682618 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGATCCA AGATACTGCT CGATGAGGAG GAGATCCCGA AGAGATGGTA TAATGTGGCG GCAGATATGC CCAGACCTCT TGACCCGCCG CTGAACCCTG CGACTCATGA GCCGCTGAAG CCCGAGGACC TCGAGCCGAT ATTTCCGAGA TCCCTTATAA AGCAGGAGAT GAGCACAGAG AGATGGATAG ACATTCCCGA GGAGGTGAGG GACGTCTACA GACTCTGGCG CCCGACACCT CTGTACAGGG CTGTCAGGCT TGAGAAGGCC CTCAAAACAC CTGCCAGGAT CTACTACAAG TACGAGGGAG TGAGCCCTGC GGGAAGCCAC AAACCGAACA CTGCTGTGCC CCAGGCTTAC TACAACATGA AGGAGGGCAT AGAGAGGATA GCCACAGAGA CAGGGGCAGG ACAGTGGGGC TCGGCGCTCG CGCTTGCCAC ATGCATCTTC GGCCTGAAAT GCACGATCTA CATGGTCCGC TCTAGCTACG ACCAGAAGCC ATACCGCAGG AGCATGATGC GGGTCTGGGG TGCGGAGTGC TTCCCGAGCC CGAGCAACAG GACGAACGCT GGCAGGCGAA TCCTGGAACA GTTCCCGGAC ACGCCTGGCA GCCTTGGAAT AGCGATATCA GAGGCTGTTG AGGATGCGGC CACGCATGAT GATACGAACT ACGCCCTCGG ATCCGTTCTG AACCACGTGC TCCTTCACCA GACCGTCGAG GGTCTTGAGG TCAAGAAGCA GTTCGAGCTC GTGGACGATT ACCCGGATGT GATATACGGC TGCTGTGGCG GGGGGAGCAA CTTCCCGGGA GTGTGCTTCC CGTTCATCCC TGACAAGCTC AATGACAAGA AGGAGCTCAG GCTTGTGGCG TGTGAGCCGA CGGCGTGCCC CAGCCTCACC AAGGGTCTGT ACACGTACGA CTTCGGAGAT ACTGCGCGCC TGACGCCGCT GCTCAAGATG TACACGCTCG GCCATGACTT CGTGCCGCCC GGGATACATG CAGGCGGGCT GAGGTACCAC GGGGATGCGC CCCTGCTCTG CAGCCTGGTG AACGCTGGAA TCATCGAGGC CCAGGCTTTC CACCAGCGAG AGGTCTTCGA TGCCGCGACG ACCTTCGCGC GCGCAGAGGG CATCGTCCCG GCGCCGGAGT CAGCGCATGC AATCAAGCCC GCGATCGACG AGGCGATCCA ATGCAGGAAG ACGGGAGAGA CGAAGACGCT GCTCATAAAC CTGAGCGGCC ATGGGCACTT CGATCTATCT GCGTACGATG CGTACAACGA TGGGATCCTC GAGGATTATG AGTATCCAGA GGAGCTGGTG AGGCAATCGC TTGCCAGGCT GCCGAAGGTG TAA
|
Protein sequence | MRSKILLDEE EIPKRWYNVA ADMPRPLDPP LNPATHEPLK PEDLEPIFPR SLIKQEMSTE RWIDIPEEVR DVYRLWRPTP LYRAVRLEKA LKTPARIYYK YEGVSPAGSH KPNTAVPQAY YNMKEGIERI ATETGAGQWG SALALATCIF GLKCTIYMVR SSYDQKPYRR SMMRVWGAEC FPSPSNRTNA GRRILEQFPD TPGSLGIAIS EAVEDAATHD DTNYALGSVL NHVLLHQTVE GLEVKKQFEL VDDYPDVIYG CCGGGSNFPG VCFPFIPDKL NDKKELRLVA CEPTACPSLT KGLYTYDFGD TARLTPLLKM YTLGHDFVPP GIHAGGLRYH GDAPLLCSLV NAGIIEAQAF HQREVFDAAT TFARAEGIVP APESAHAIKP AIDEAIQCRK TGETKTLLIN LSGHGHFDLS AYDAYNDGIL EDYEYPEELV RQSLARLPKV
|
| |