| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1251 |
|---|
| Symbol | |
|---|
| ID | 4463182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1349765 |
|---|
| End bp | 1350172 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639700268 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_843670 |
|---|
| Protein GI | 116754552 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.727685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TGATGATGGT GGGGCTGGAG TATGGCTCTG ACATAATGGA TGCTATAAGA
GGGGTGGCTG CAGACCGATC CATAGATTCC GGCTTCTTCA GTGTCATAGG AGCTCTCTCC
TCCGCCAATC TTGCTTACTA CGATCAGACA GAGAAGGTGT ACAGGAAGCG CAGCTTTGAG
GGCGCATACG AGATAGCATC CTGCACGGGA AATATCTCTT TGAAAGATGG AGAGAGATTC
ATCCATGCGC ACATAGTGCT CGCAGATGAG AATTACAATC TCATCGGTGG TCATCTTCTC
GGCGGGAGGA TCTTTGCTGC CGAGCTTCAC ATCACAGATC TCGAGGAAAA GGCCCATGTC
AGGGATTATG ATCCTGTGAC GGGTCTGTTT CTCTGGAGGC GGAGTTGA
|
|---|
| Protein sequence | MPKMMMVGLE YGSDIMDAIR GVAADRSIDS GFFSVIGALS SANLAYYDQT EKVYRKRSFE
GAYEIASCTG NISLKDGERF IHAHIVLADE NYNLIGGHLL GGRIFAAELH ITDLEEKAHV
RDYDPVTGLF LWRRS
|
|---|
| |