| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1250 |
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| Symbol | |
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| ID | 4463181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1346439 |
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| End bp | 1349768 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639700267 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_843669 |
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| Protein GI | 116754551 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGCTG AGTACTTCGA GCGTCTTGAG CGCGGTTTGA GAGAGGAGAT GGAGATCGCT
CGGAGGGCGA GATCGAAAGG TCTTGACCCA GAGACAGATG TGGAGATACC CATAGCTGTC
GACCTGGCAG AGCGGGTCGA GAAGCTCGTC TCCATACCAG GAGTTGCAGA GAGGATCAGG
GAGTTCGAGG TGCAGGGGCT CAGCAGGGAG GAGGCAGCGC TCGCCATCGG CAGGGATTTC
GCAGAGGGGC GTCTGGGTAA AGGCGCGAGC AGGCTCGATG CCATCGATAT GGCCATAAGG
ACCTCTGTGG CGCTCCTGAC TGAGGGGGTG GTGGCAGCAC CGATCGAGGG CATAGCCAGG
GTCGGTTTGG GAAAGAACGA CGACGGTAGC GAGTATCTGA AGGTGTACTA CGCAGGCCCG
ATAAGGTCAG CAGGCGGAAC CGCCCAGGCG CTCTCAGTGC TTGTCGCGGA TTACGTCAGG
CGGAGCATGG GCATCGCTCC CTACAAACCC ACAGATGAGG AGATAGAGAG GTACGTCGAG
GAGATCGGGC TATACAAGCG CCTCCAGCAC CTCCAGTACA CACCATCTGA TGATGAGATA
AGAACGATAA TCAGAAACTG TCCTGTGTGC ATAGATGGCG AGCCCACAGA GGAGGAGGAG
GTCTCCGGCT ACCGTGATCT TCCCAGAGTT GAGACGAACA GGGTTCGCGG GGGCATCGCG
CTCGTCTCCG CAGAGGGCAT CGCGCTGAAG CGCCCGAAGA TAAAGAAGCA TGTCTCAAAG
CTCGGAATAG ATGGCTGGGG GTGGCTGGAC GTGCTTGGCG GGGAGAAGAA GGATGGTGGG
GGATCGAGCG GGAAGTTTCT AAGGGATCTG ATAGCGGGCA GGCCGGTCTT CTCCCATCCA
TCCAGGCCCG GAGGATTCAG GCTTCGTTAC GGGAGATCCA GAAACACAGG TCTCGCAGCA
GCCGGCATAA ATCCGGCCAC GATGATGGTG CTCAACCAGT TCCTTGCCCC CGGAACCCAG
ATCAAGGTCG AGCAGCCAGG CAAGGCTGCC GCCGTAGCTC CGGTGAGCTC CATCGAGGGT
CCCACTGTAC GGCTGACGAA TGGCGATGTT GTGCGCATAG ACGATCCGTC ATCGTTTCCG
TGGATATCAA GCCCTGAGGC TCTGAGGAGG AATATCTCAA AGATCATAGA CCTCGGCGAG
ATCCTGGTCA GCTTCGGTGA TTTCATGGAG AACAACAGGC CGCTTGCGCC CGCATCCTAC
ACCTTCGAGT GGTGGGCTGA GGAGTTCAGG AGGGCTGGCG GCGATCCGGC GGGAATGGAG
CATGTAGATG GAAGAACGGC GATACGGCTC TCGAGAGATT TCGGCGTGCC GCTTCATCCC
GATCACACAT ATCTCTGGCA CGATATAACC CTGGATGAGC TGGATCTGCT TGCGGATGCA
GCCTCTGATG GGGAAATCGA CGGTGATGCG CTTCTCATGG ATATGCGCGA GGATGTGAAG
GAGGTCCTAG AGAAGCTGCT TGTCCATCAC AAAGTCAGAG ATGGAATGAT CGTGGTGGAG
GACGCACTCC CGCTCCTACT TTGCCTGGGC GTGGATGAGA CCGGAAGGCG CTGGAGAAGA
GAGGATCTTA ATGCGGATAA TGCGCTGAGT GCCGTCAACC AGCTCTCTGG ACTCGTAATA
AGGGCGAGAG CGCCCACCAG GATCGGATGC AGGATGGGAC GGCCGGAGAA ATCGGACAGG
AGGGAGATGC GCCCTCCGCC GCACGTCCTC TTCCCCACGG GCTCTGAAGG AGGAAAGAGC
CGTCTTGTGA ATGAGGCCGC AGAGCATGGA TTCATAGAGG TTGTTGTGGA AAGAAGGAGA
TGCCCGTCCT GCGGTAAGGA GGGGTTTGCG TTCAGATGCG AGTGTGGAGC CCATACAGAG
CGTGTGCGTG CATGTCTGTC ATGCGGGGTG CGTGCCGACG ATAAATGCCC CAGGTGCGGC
ACAGAGACGA GCGCAGCCAC GCGGATGAGG ATAGATGTGA AAGGCACTCT CGCAAGAGCT
CTTGAATCCC TTGGGGAACG TGTTGATAAC ATCAGGGGCG TCATGGGGCT GACGTCAAGG
GACTCCACGC CGGAGCCGCT CGAGAAGGGG GTGTTGAGGG CAAAGCACGG CGTGTTTATC
TTCAAGGACG GGACATCAAG GTATGATCTA ACAGATCTTC CTCTCACGCA CTTCCGGCCC
AGAGAGATCG GCACCAGCGT GGATGCTCTT CTCGATCTCG GGTACACGCA CGACATCCAT
GGAAAACCTC TGGAGAGCGA TGATCAGATC CTGGAGCTGA AGGTCCAGGA CGTCGTGCTC
TGCAGAAATG CTGGCGACTG GCTTCTCAGG GTCTCGAAGT TTATAGATGA TCTCCTCGTT
AAATTCTATG GTCTTGAGCC ATACTACAAT GCGGAGAGAC CTGAGGATCT CATAGGTAGA
CTGATGATCG GGCTGGCCCC GCACACATCC GCTGGAGTTC TCTGCAGGCT CATAGGGTTC
ACGAGGGCGA GTGCTGGATA CGCACATCCC TATTTCCACG CAGCCAAGAG GAGAAACTGT
GATGGCGATG AGGACTGCGT GATGCTGCTG ATGGACGCGC TGCTGAACTT CTCCAGATCC
TACCTGCCGG AGAAGAGGGG TGGGAAGATG GACGCGCCTC TCGTCCTGAC AACAAGAATT
AACCCCGCAG AGGTCGACAA GGAGGCCCAC AACCTCGATC TATCTTTCAT TTACCCTCTT
GAGTTCTATG AGGCGACTTT GAGGAATGCA AACCCGAAGG ATGTTGAGGG GTTGATAGAT
CTCGTCTCAA AGCGGCTTGG AAGCGAAGGG CAGTACTGTG GCTTCGGCTT CACCCACGAT
ACAGATGATA TCGCAGGTGG TCCGAGAAAC AGCTCCTACA AGACCCTTGA GACGATGATA
GACAAAATGA AATCCCAGCT GGAGCTCGCC AAACTGATTA GAGCTGTTGA TGCGACTGAT
GTGGCTGAGC GTGTGATAAA CTCTCATTTC CTGCCGGATC TGATGGGAAA CCTACGGGCG
TTCTCGCGCC AGAGTGTGCG CTGCGTGAAA TGCAACGCGA AGTACAGGAG GCCTCCGCTC
AGCGAGAGCT GCCCGAAGTG TGGTGGGAGG CTTGTGCTCA CAGTCCATGA GGGCAGCGTC
AGAAAATACC TCGAGGTCTC GATGAAGGTC GCGGAGGAGT ACGGCGTGTC GAGCTATACG
CGCCAGCGGC TCGAGCTGAT CCAAATGGAG ATAGAATCGC TATTCAGATC GGATAAGGTG
AAGCAGACTG GCCTCGCGGA TTTTGTGTGA
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| Protein sequence | MSAEYFERLE RGLREEMEIA RRARSKGLDP ETDVEIPIAV DLAERVEKLV SIPGVAERIR
EFEVQGLSRE EAALAIGRDF AEGRLGKGAS RLDAIDMAIR TSVALLTEGV VAAPIEGIAR
VGLGKNDDGS EYLKVYYAGP IRSAGGTAQA LSVLVADYVR RSMGIAPYKP TDEEIERYVE
EIGLYKRLQH LQYTPSDDEI RTIIRNCPVC IDGEPTEEEE VSGYRDLPRV ETNRVRGGIA
LVSAEGIALK RPKIKKHVSK LGIDGWGWLD VLGGEKKDGG GSSGKFLRDL IAGRPVFSHP
SRPGGFRLRY GRSRNTGLAA AGINPATMMV LNQFLAPGTQ IKVEQPGKAA AVAPVSSIEG
PTVRLTNGDV VRIDDPSSFP WISSPEALRR NISKIIDLGE ILVSFGDFME NNRPLAPASY
TFEWWAEEFR RAGGDPAGME HVDGRTAIRL SRDFGVPLHP DHTYLWHDIT LDELDLLADA
ASDGEIDGDA LLMDMREDVK EVLEKLLVHH KVRDGMIVVE DALPLLLCLG VDETGRRWRR
EDLNADNALS AVNQLSGLVI RARAPTRIGC RMGRPEKSDR REMRPPPHVL FPTGSEGGKS
RLVNEAAEHG FIEVVVERRR CPSCGKEGFA FRCECGAHTE RVRACLSCGV RADDKCPRCG
TETSAATRMR IDVKGTLARA LESLGERVDN IRGVMGLTSR DSTPEPLEKG VLRAKHGVFI
FKDGTSRYDL TDLPLTHFRP REIGTSVDAL LDLGYTHDIH GKPLESDDQI LELKVQDVVL
CRNAGDWLLR VSKFIDDLLV KFYGLEPYYN AERPEDLIGR LMIGLAPHTS AGVLCRLIGF
TRASAGYAHP YFHAAKRRNC DGDEDCVMLL MDALLNFSRS YLPEKRGGKM DAPLVLTTRI
NPAEVDKEAH NLDLSFIYPL EFYEATLRNA NPKDVEGLID LVSKRLGSEG QYCGFGFTHD
TDDIAGGPRN SSYKTLETMI DKMKSQLELA KLIRAVDATD VAERVINSHF LPDLMGNLRA
FSRQSVRCVK CNAKYRRPPL SESCPKCGGR LVLTVHEGSV RKYLEVSMKV AEEYGVSSYT
RQRLELIQME IESLFRSDKV KQTGLADFV
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