| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1201 |
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| Symbol | tfx |
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| ID | 4462343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1296425 |
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| End bp | 1296865 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700217 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_843622 |
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| Protein GI | 116754504 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1356] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR00721] DNA-binding protein, Tfx family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCGC GCGGGTTTCT CACTGAGAGG CAGATCCAGG TCCTGCGCCT CAGAAGGAGT
GGGATGTCGC AGGAGGAGGT GGCTGCTCTC CTTGGCACGA CCAGAGCGAA TGTCAGCATC
CTGGAGAAGA GGGCGATGCA GAACATAGAC CGCGCACTTG AGACATTGAA GCAGTGGAAG
ATGATCCACG CGCCTGTTGC CGTCAGTATC CCTGAGGGCA CAGACCTCTT CGCCCTTCCC
GGGATCATAT TCAGAGAGGC CGACACGAGG GGATTGAAGC TGCCGGTGAA CTCAATAGAT
ATCCTGGCGG GATTGAAGGA GATCGCCCCG CATCTCACCA GAAGGCGACT CATTGAGAGG
AGCTTTGATA TCTACGTCAC AGAGGACGGG GAGATCTATG TCGAGGAGAC GGGTGGGAGC
CGTGCATCCA GATCAATGTG A
|
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| Protein sequence | MNSRGFLTER QIQVLRLRRS GMSQEEVAAL LGTTRANVSI LEKRAMQNID RALETLKQWK
MIHAPVAVSI PEGTDLFALP GIIFREADTR GLKLPVNSID ILAGLKEIAP HLTRRRLIER
SFDIYVTEDG EIYVEETGGS RASRSM
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