Gene Mthe_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1180 
Symbol 
ID4462226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1267580 
End bp1268599 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID639700197 
Productputative deoxyhypusine synthase 
Protein accessionYP_843602 
Protein GI116754484 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.390749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATC CCGAGTCAGA AATGCGGCAG AGAACGACGA TTCCTATGGT CGACAGAAGC 
ATAGGAGAGC TCGTCTCTGA TATGGCCCGG ATGGGGTTTC AGGCAGGGCA GCTTGGCCAG
TCCCTGCGCG TCTGGGAGAA CATGCTGAGC AGGGATGTGA CGGTATTTCT GGGACTGGCA
GGCGCCATGG TCCCCGCGGG GCTCCAGGAG ATGATCGCGT ATCTGATATC CAGAAGATAC
GTGGACTGTC TGGTGAGCAC AGGCGCGAAC CTCTTCCACG ATCTATGTGA AGGACTCGGC
ATAATGCACT ACAGGGGGAG TTCGTGCGCA GATGATGCTC ACCTGAACGA ATGCAAGATC
GACAGGATCT TCGATGTATT CGTATCTGAG GTCGAGCTGC ACAGGGCGGA CAAGTACATC
TCAGATCTTG TAATGAGCCT CAGGACCGAC ATCATGTATT CGTCCAGAGA GATAATGGAG
CTCCTCGGAA GAGAGCTGCC GGAGACCACG ATCCTGGGAG CTGCGTACCG TGCTGGAGTG
CCGATATTTG TGCCGGCGCT GTCTGACAGC TCCATAGGGA TAGGGATGGT CATCGCCTGG
CGCAACGGTC ACAGGGTTAT CGTGGACCAG ATCAGGGATG TGGATGAGAT AACGCAGATA
TCGGAGAAGT CGGCGGAGAC CGGAGTGGTG TTCATCGGCG GCGGCGTGCC GAAGAACTTC
ATACAGCAGA CGAAGGTCAT ATCTGAGCTC ATGGGAACAT ACCGGGGAGG TCACTCGTAT
GCTATACAGT ACACCACGGA CACGCCGCAT TTTGGGGGGC TCTCGGGATG CACATTCAGC
GAGGCCGTAT CGTGGGGGAA GGTTGATAAA GAGGCGAGGA TGGCACAGGT GTTCTCGGAT
GCCACGATCA CCGTGCCACT TGTGGTCCAT GCGCTGAGGG AGCGCGTGAA GAAAAGATAC
TCTGTGCCCA GGTTCACCTG GAATGGATCC GAACTCGAGC TCGTCTATGA GCAGGTCTAG
 
Protein sequence
MSYPESEMRQ RTTIPMVDRS IGELVSDMAR MGFQAGQLGQ SLRVWENMLS RDVTVFLGLA 
GAMVPAGLQE MIAYLISRRY VDCLVSTGAN LFHDLCEGLG IMHYRGSSCA DDAHLNECKI
DRIFDVFVSE VELHRADKYI SDLVMSLRTD IMYSSREIME LLGRELPETT ILGAAYRAGV
PIFVPALSDS SIGIGMVIAW RNGHRVIVDQ IRDVDEITQI SEKSAETGVV FIGGGVPKNF
IQQTKVISEL MGTYRGGHSY AIQYTTDTPH FGGLSGCTFS EAVSWGKVDK EARMAQVFSD
ATITVPLVVH ALRERVKKRY SVPRFTWNGS ELELVYEQV