| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1170 |
|---|
| Symbol | |
|---|
| ID | 4462635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1254200 |
|---|
| End bp | 1254652 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639700187 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_843592 |
|---|
| Protein GI | 116754474 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATGA ACCCCGATAA AAACCAAGTG GATGAGCCAG AGATCCCCGA GGTCCTGCCC
GATGAATCGT GGCCCACAGA CCGTCTCATA GAGGCGACCA GAGACAAGAA CATGCTCGTC
AGGTCGAACG CTGTGAGCAT TCTGTCCGCC AGAGAGGGAC CGGAAGTCGT CGAGGCCCTC
ATCCAGGCGA TGAAGGATGA GGATTATGTT GTGAGAAGCA ACGCGATGGT CAGGCTCTCC
GAGAGGGGCA CAGCGGTCCT CGACAGAGTT CTGGAGGCGC TGAACGACCC TGATGAAGAG
ATACGGGCCG GGGCTGCATG GGTGCTCGGT GAGCTGAAGG ACCCCAGGGC GATAGAGCCG
CTTCAGAAGG CGATGGACGA TGAGAATATG GTCGTGAGAA TCCAGGCAAA GGCATCGCTG
ATGGCAATGG GGGTCATTGG CCAGAAGAAG TGA
|
|---|
| Protein sequence | MEMNPDKNQV DEPEIPEVLP DESWPTDRLI EATRDKNMLV RSNAVSILSA REGPEVVEAL
IQAMKDEDYV VRSNAMVRLS ERGTAVLDRV LEALNDPDEE IRAGAAWVLG ELKDPRAIEP
LQKAMDDENM VVRIQAKASL MAMGVIGQKK
|
|---|
| |