Gene Mthe_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1170 
Symbol 
ID4462635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1254200 
End bp1254652 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID639700187 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_843592 
Protein GI116754474 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGA ACCCCGATAA AAACCAAGTG GATGAGCCAG AGATCCCCGA GGTCCTGCCC 
GATGAATCGT GGCCCACAGA CCGTCTCATA GAGGCGACCA GAGACAAGAA CATGCTCGTC
AGGTCGAACG CTGTGAGCAT TCTGTCCGCC AGAGAGGGAC CGGAAGTCGT CGAGGCCCTC
ATCCAGGCGA TGAAGGATGA GGATTATGTT GTGAGAAGCA ACGCGATGGT CAGGCTCTCC
GAGAGGGGCA CAGCGGTCCT CGACAGAGTT CTGGAGGCGC TGAACGACCC TGATGAAGAG
ATACGGGCCG GGGCTGCATG GGTGCTCGGT GAGCTGAAGG ACCCCAGGGC GATAGAGCCG
CTTCAGAAGG CGATGGACGA TGAGAATATG GTCGTGAGAA TCCAGGCAAA GGCATCGCTG
ATGGCAATGG GGGTCATTGG CCAGAAGAAG TGA
 
Protein sequence
MEMNPDKNQV DEPEIPEVLP DESWPTDRLI EATRDKNMLV RSNAVSILSA REGPEVVEAL 
IQAMKDEDYV VRSNAMVRLS ERGTAVLDRV LEALNDPDEE IRAGAAWVLG ELKDPRAIEP
LQKAMDDENM VVRIQAKASL MAMGVIGQKK