| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1075 |
|---|
| Symbol | |
|---|
| ID | 4461800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1164658 |
|---|
| End bp | 1166892 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639700093 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_843499 |
|---|
| Protein GI | 116754381 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0202284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATG AGTCAAACAT TTTTTTTAGA TTCTGGCTTA AATTGCACGA TTTCATAATA
AAAAACGAAG TGTTTTTGGT TCTCTTGTCG GTATATTTCA TATACAATAT CAATTGTAGA
ACCCTTGGAT CCGGAGATAC CATTCCAGCT TCTTTGTTAC CATTCAGCAT ATTGGAATAC
CACAATTTAT ATATGGATAA TTTTTATTTT TATTATTTTT CTAATTATGA TCAGCTATGG
TATTTCAAAG AGGCTGATGG TCATTTTTTG TCGAGCTATC CAATTGTAAC ACCATTATTA
ATCACACCAC TTTATGTAAT TCCATATATT GTTTTGAAAT TTAATAATTT GCCAATCGAT
TTATTCCATC CTGGGTTCGC TAAAACAGTT TGCGTGATGG AGAAGCTATC CGCATCTTTA
ATTGCATCGA CATCTGTTGT TTTTGTTTAT TTATCAATAA AAGAGCTAAT AAATAGAAGA
GTTGCATTTA TCGTAGCAGT ACTATTTGCA TTTGGAACCA ACACCTGGGC AATCAGCAGT
CAGGCACTGT GGCAGCATGG ATTGATAGAG CTTATCCTGG CCATGTTCAT ATATCTAGTT
TTAATAAACG AAAAGATAAA GTCAAATAAG ATAGTTATTT CTCTGGGTGT TTTATCCGGG
TTATTCGTAT TTAACAGACC AATCGACAGC GTACTATTGG CGCCTGTGTT ATATTATATA
TTTGATATGA GAGATAAAAG GATCATTTAT TATATATTTT CAGCATTTTC ATCCGGTGCA
CCGTTTCTTT TATATAATAT TTATTATTTT GGAAATTTAT TTGGAGGTTA TACAGATCTG
CTAAAATTGT TTGATTTAAG TCCTGAGATG GTTACAAGAT TTGCTGGATT GCTAGTTAGC
CCAAGTCGAG GGCTCTTCGT ATATACTCCT ATCACGTTGT TATCCGTGTT AGGATTTGCT
AAAGTTATGC GGATACCCAA CAAACGAATC AAAAATTTTC TAATTTTGAT GGGCATTTCG
TGCTTTACTC TGGTCATAAT ATACAGCTCT TTTATCATAT GGTGGGCAGG TGGGTCGTAT
GGACCCAGGT TCCTGACTGG CATGCTTCCT GCAATGGCGA TCTTTTTAGG ATTTTTTATC
AAAGACATTA AATTGAACGT TTACAGATTT AAAAATTTAT CAATTATTTT TATCGTATCC
GCCCTAGTTT TTTGGTCGTT TTTTACACAA TTTGTCGGTG CATTCTATTA TCCAAACGGC
AACTGGGATG GCGATCCAAA CGTGGATCTG CACCCTGAAA AATTGTGGGA CTGGAAAGAC
ACACAATTGA CCAGAACATT CAATGCTGGT ATGGCATCAT CACCACTGAG CTGCTTTAAA
AATATCTTCT CTGCCATGTC TCTTTTACAT ATAAAAGATA TCTCCGATTA CAGCATAATG
AAACTTGCCG GCTGGTATGG AATAGAGTTA TGGAATAATG TGCCCACACG ATGGATGCAA
GATGATGCAA AGGTGGCATT AAAATCTCCC GATAATCAGA CATGCGAAAT GAGCTTGCAA
GCAACGAGCT TCTACCATCC AAGGACTTTG GAGATATATG CAGGAGACGA GAAGATATTA
ACCGTTGAAA TCCCCAGCGA CGGATTTATC AATCTGTCTG TACCTGTAAG CCTTGTAGAG
GGCATGAATG TAATACGCAT GCATGTGCCA GAGGGTTGCG AAAGACCTTG CGACATAAAA
GAGCTGAACA ACCCTGACTC CAGGTGCCTG AGCATTGCTG TGCAGAACTT AAAGATCATG
CCATCTGAGT CCATCATATA CTATACACCC ATTTCAGGGT TCTATGGTAT CGAATCCTGG
TCCGGAATAC CAACAAACTG GATCATGGAT GATGCAGATC TTGGAGTATT TTCGCTGGAT
AATTTAACCT GTAACCTAAG CATACGAGCG AGGAGCTTCC ATTGTACAAG AACGCTGGAA
ATATATGCAG GAAATGCTTT TATAAATAGC GTTTCAGTTC CGAGTGACGA CTTCATCAAT
GTAACATGTT CCATAAAGCT TGCTAGGGGC ATGAATACAA TACAGCTGCG TGTACCAGAT
GGCTGCGATA GACCATCAGA CATTAGAGAG ATAAATGTCC AAGATCGGAG ATGCCTTAGC
ATGGCTCTAC AGAACGTGAG AATAGATTGC GGAAATCGAT TGAGGTGTGA CCAAAGTGGA
GAGAGAACCT GCTGA
|
|---|
| Protein sequence | MEYESNIFFR FWLKLHDFII KNEVFLVLLS VYFIYNINCR TLGSGDTIPA SLLPFSILEY
HNLYMDNFYF YYFSNYDQLW YFKEADGHFL SSYPIVTPLL ITPLYVIPYI VLKFNNLPID
LFHPGFAKTV CVMEKLSASL IASTSVVFVY LSIKELINRR VAFIVAVLFA FGTNTWAISS
QALWQHGLIE LILAMFIYLV LINEKIKSNK IVISLGVLSG LFVFNRPIDS VLLAPVLYYI
FDMRDKRIIY YIFSAFSSGA PFLLYNIYYF GNLFGGYTDL LKLFDLSPEM VTRFAGLLVS
PSRGLFVYTP ITLLSVLGFA KVMRIPNKRI KNFLILMGIS CFTLVIIYSS FIIWWAGGSY
GPRFLTGMLP AMAIFLGFFI KDIKLNVYRF KNLSIIFIVS ALVFWSFFTQ FVGAFYYPNG
NWDGDPNVDL HPEKLWDWKD TQLTRTFNAG MASSPLSCFK NIFSAMSLLH IKDISDYSIM
KLAGWYGIEL WNNVPTRWMQ DDAKVALKSP DNQTCEMSLQ ATSFYHPRTL EIYAGDEKIL
TVEIPSDGFI NLSVPVSLVE GMNVIRMHVP EGCERPCDIK ELNNPDSRCL SIAVQNLKIM
PSESIIYYTP ISGFYGIESW SGIPTNWIMD DADLGVFSLD NLTCNLSIRA RSFHCTRTLE
IYAGNAFINS VSVPSDDFIN VTCSIKLARG MNTIQLRVPD GCDRPSDIRE INVQDRRCLS
MALQNVRIDC GNRLRCDQSG ERTC
|
|---|
| |